TADBD : a sensitive and fast method for detection of typologically associated domain boundaries
A topologically associated domain (TAD) is a self-interacting genomic block. Detection of TAD boundaries on Hi-C contact matrix is one of the most important issues in the analysis of 3D genome architecture at TAD level. Here, we present TAD boundary detection (TADBD), a sensitive and fast computatio...
Ausführliche Beschreibung
Bibliographische Detailangaben
| Veröffentlicht in: | BioTechniques. - 1993. - 69(2020), 1 vom: 01. Juli, Seite 376-383
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| 1. Verfasser: |
Lyu, Hongqiang
(VerfasserIn) |
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| Weitere Verfasser: |
Li, Lin,
Wu, Zhifang,
Wang, Tian,
Zheng, Jiguang,
Wang, Hongda |
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| Format: | Online-Aufsatz
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| Sprache: | English |
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| Veröffentlicht: |
2020
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| Zugriff auf das übergeordnete Werk: | BioTechniques
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| Schlagworte: | Journal Article
Research Support, Non-U.S. Gov't
Hi-C
haar-based algorithm
topologically associated boundary detection
Chromatin |
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