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231224s2015 xx |||||o 00| ||eng c |
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|a 10.2144/000114280
|2 doi
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|a pubmed25n0832.xml
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|a DE-627
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|e rakwb
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|a eng
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|a Wu, Haotian
|e verfasserin
|4 aut
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|a Rapid method for the isolation of mammalian sperm DNA
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|c 2015
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|a Text
|b txt
|2 rdacontent
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|a ƒaComputermedien
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|2 rdamedia
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|a ƒa Online-Ressource
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|2 rdacarrier
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|a Date Completed 03.03.2016
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|a Date Revised 03.01.2025
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|a published: Electronic-eCollection
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|a Citation Status MEDLINE
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|a The unique DNA packaging of spermatozoa renders them resistant to DNA isolation techniques used for somatic cells, requiring alternative methods that are slow and labor intensive. Here we present a rapid method for isolating high-quality sperm DNA. Isolated human sperm cells were homogenized with 0.2 mm steel beads for 5 min at room temperature in the presence of guanidine thiocyanate lysis buffer supplemented with 50 mM tris(2-carboxyethyl)phosphine (TCEP). Our method yielded >90% high-quality DNA using 3 different commercially available silica-based spin columns. DNA yields did not differ between immediate isolation (2.84 ± 0.04 pg/cell) and isolation after 2 weeks of homogenate storage at room temperature (2.91 ± 0.13 pg/cell). DNA methylation analyses revealed similar methylation levels at both time points for three imprinted loci. Our protocol has many advantages: it is conducted at room temperature; lengthy proteinase K (ProK) digestions are eliminated; the reducing agent, TCEP, is odorless and stable at room temperature; nucleic acids are stabilized, allowing storage of homogenate; and it is adaptable for other mammalian species. Taken together, the benefits of our improved method have important implications for settings where sample processing constraints exist
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|a Journal Article
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|a Research Support, N.I.H., Extramural
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|a Research Support, Non-U.S. Gov't
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|a DNA isolation
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|a DNA purification
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|a epigenetics
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|a genetics
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|a methods
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|a nucleic acids
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|a sperm
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|a spermatozoa
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|a Phosphines
|2 NLM
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|a Reducing Agents
|2 NLM
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|a tris(2-carboxyethyl)phosphine
|2 NLM
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|a H49AAM893K
|2 NLM
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|a Silicon Dioxide
|2 NLM
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|a 7631-86-9
|2 NLM
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|a DNA
|2 NLM
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|a 9007-49-2
|2 NLM
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|a de Gannes, Matthew K
|e verfasserin
|4 aut
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1 |
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|a Luchetti, Gianna
|e verfasserin
|4 aut
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1 |
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|a Pilsner, J Richard
|e verfasserin
|4 aut
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0 |
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|i Enthalten in
|t BioTechniques
|d 1993
|g 58(2015), 6 vom: 13. Juni, Seite 293-300
|w (DE-627)NLM012627046
|x 1940-9818
|7 nnns
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1 |
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|g volume:58
|g year:2015
|g number:6
|g day:13
|g month:06
|g pages:293-300
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|u http://dx.doi.org/10.2144/000114280
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|d 58
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