Nuclear run-on assay using biotin labeling, magnetic bead capture and analysis by fluorescence-based RT-PCR

In this report, we present a fluorescence-based approach to the assessment of cellular gene expression and transcription rates. Nuclear run-on was performed by supplying biotin-16-UTP to nuclei, and labeled transcripts were bound to streptavidin-coated magnetic beads. Total cDNA was then synthesized...

Ausführliche Beschreibung

Bibliographische Detailangaben
Veröffentlicht in:BioTechniques. - 1993. - 29(2000), 5 vom: 01. Nov., Seite 1012-4, 1016-7
1. Verfasser: Patrone, G (VerfasserIn)
Weitere Verfasser: Puppo, F, Cusano, R, Scaranari, M, Ceccherini, I, Puliti, A, Ravazzolo, R
Format: Aufsatz
Sprache:English
Veröffentlicht: 2000
Zugriff auf das übergeordnete Werk:BioTechniques
Schlagworte:Journal Article Research Support, Non-U.S. Gov't DNA Primers Drosophila Proteins Proto-Oncogene Proteins RNA, Messenger Tretinoin 5688UTC01R Cycloheximide 98600C0908 mehr... Proto-Oncogene Proteins c-ret EC 2.7.10.1 Receptor Protein-Tyrosine Kinases Ret protein, Drosophila Uridine Triphosphate UT0S826Z60
LEADER 01000caa a22002652 4500
001 NLM110003675
003 DE-627
005 20250202085039.0
007 tu
008 231222s2000 xx ||||| 00| ||eng c
028 5 2 |a pubmed25n0367.xml 
035 |a (DE-627)NLM110003675 
035 |a (NLM)11084863 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Patrone, G  |e verfasserin  |4 aut 
245 1 0 |a Nuclear run-on assay using biotin labeling, magnetic bead capture and analysis by fluorescence-based RT-PCR 
264 1 |c 2000 
336 |a Text  |b txt  |2 rdacontent 
337 |a ohne Hilfsmittel zu benutzen  |b n  |2 rdamedia 
338 |a Band  |b nc  |2 rdacarrier 
500 |a Date Completed 01.03.2001 
500 |a Date Revised 29.01.2022 
500 |a published: Print 
500 |a Citation Status MEDLINE 
520 |a In this report, we present a fluorescence-based approach to the assessment of cellular gene expression and transcription rates. Nuclear run-on was performed by supplying biotin-16-UTP to nuclei, and labeled transcripts were bound to streptavidin-coated magnetic beads. Total cDNA was then synthesized by means of random hexamer primed reverse transcription of captured molecules. To monitor transcript abundance in cDNA, both from nuclear run-on and total RNA, we propose a semiquantitative PCR approach based on the use of fluorescent primers 
650 4 |a Journal Article 
650 4 |a Research Support, Non-U.S. Gov't 
650 7 |a DNA Primers  |2 NLM 
650 7 |a Drosophila Proteins  |2 NLM 
650 7 |a Proto-Oncogene Proteins  |2 NLM 
650 7 |a RNA, Messenger  |2 NLM 
650 7 |a Tretinoin  |2 NLM 
650 7 |a 5688UTC01R  |2 NLM 
650 7 |a Cycloheximide  |2 NLM 
650 7 |a 98600C0908  |2 NLM 
650 7 |a Proto-Oncogene Proteins c-ret  |2 NLM 
650 7 |a EC 2.7.10.1  |2 NLM 
650 7 |a Receptor Protein-Tyrosine Kinases  |2 NLM 
650 7 |a EC 2.7.10.1  |2 NLM 
650 7 |a Ret protein, Drosophila  |2 NLM 
650 7 |a EC 2.7.10.1  |2 NLM 
650 7 |a Uridine Triphosphate  |2 NLM 
650 7 |a UT0S826Z60  |2 NLM 
700 1 |a Puppo, F  |e verfasserin  |4 aut 
700 1 |a Cusano, R  |e verfasserin  |4 aut 
700 1 |a Scaranari, M  |e verfasserin  |4 aut 
700 1 |a Ceccherini, I  |e verfasserin  |4 aut 
700 1 |a Puliti, A  |e verfasserin  |4 aut 
700 1 |a Ravazzolo, R  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t BioTechniques  |d 1993  |g 29(2000), 5 vom: 01. Nov., Seite 1012-4, 1016-7  |w (DE-627)NLM012627046  |x 0736-6205  |7 nnns 
773 1 8 |g volume:29  |g year:2000  |g number:5  |g day:01  |g month:11  |g pages:1012-4, 1016-7 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_21 
912 |a GBV_ILN_22 
912 |a GBV_ILN_39 
912 |a GBV_ILN_40 
912 |a GBV_ILN_50 
912 |a GBV_ILN_60 
912 |a GBV_ILN_62 
912 |a GBV_ILN_65 
912 |a GBV_ILN_70 
912 |a GBV_ILN_99 
912 |a GBV_ILN_121 
912 |a GBV_ILN_130 
912 |a GBV_ILN_227 
912 |a GBV_ILN_350 
912 |a GBV_ILN_618 
912 |a GBV_ILN_640 
912 |a GBV_ILN_754 
912 |a GBV_ILN_2001 
912 |a GBV_ILN_2002 
912 |a GBV_ILN_2003 
912 |a GBV_ILN_2005 
912 |a GBV_ILN_2006 
912 |a GBV_ILN_2007 
912 |a GBV_ILN_2008 
912 |a GBV_ILN_2009 
912 |a GBV_ILN_2010 
912 |a GBV_ILN_2012 
912 |a GBV_ILN_2015 
912 |a GBV_ILN_2018 
912 |a GBV_ILN_2023 
912 |a GBV_ILN_2035 
912 |a GBV_ILN_2040 
912 |a GBV_ILN_2060 
912 |a GBV_ILN_2099 
912 |a GBV_ILN_2105 
912 |a GBV_ILN_2121 
912 |a GBV_ILN_2470 
951 |a AR 
952 |d 29  |j 2000  |e 5  |b 01  |c 11  |h 1012-4, 1016-7