PlasmoDocking : A User-Friendly Open-Source Web Tool for Virtual Screening Targeting Plasmodium falciparum Enzymes

© 2025 The Author(s). Journal of Computational Chemistry published by Wiley Periodicals LLC.

Bibliographische Detailangaben
Veröffentlicht in:Journal of computational chemistry. - 1984. - 46(2025), 23 vom: 05. Sept., Seite e70225
1. Verfasser: Guariero, Fernando Loza (VerfasserIn)
Weitere Verfasser: Macedo, Eduardo Pantoja de, Laia, Elise Bittencourt de, Evaristo, Joseph Albert Medeiros, Evaristo, Geisa Paulino Caprini, Zanchi, Fernando Berton
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2025
Zugriff auf das übergeordnete Werk:Journal of computational chemistry
Schlagworte:Journal Article Plasmodium falciparum AutodockGPU docking multi‐target web‐based tool Antimalarials Ligands Enzyme Inhibitors
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520 |a Virtual screening through molecular docking represents a fundamental computational methodology extensively employed in the identification of therapeutic compounds for malaria and other parasitic diseases. Although numerous software platforms are available, including AutodockGPU, the command-line interface requirements present significant barriers to non-specialized users, while multi-target screening protocols introduce additional complexity in receptor preparation procedures. To address these limitations, we developed Plasmodocking, a comprehensive web-based platform designed to automate molecular docking simulations against predefined Plasmodium falciparum targets (https://plasmodocking-unir.ecotechamazonia.com.br/). The platform enables users to submit up to 10 molecular structures (.sdf format) for automated AutodockGPU screening against 38 pre-configured parasite targets, facilitating systematic comparison of binding energies with co-crystallized ligands. Developed using Python and Next.js, Plasmodocking accelerates malaria drug discovery by enabling simultaneous multi-target docking simulations within a single experimental framework. The open-source codebase is available at: https://github.com/LABIOQUIM/PlasmoDocking-Client 
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700 1 |a Zanchi, Fernando Berton  |e verfasserin  |4 aut 
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