Ancient large-scale gene duplications and diversification in bryophytes illuminate the plant terrestrialization

© 2024 The Author(s). New Phytologist © 2024 New Phytologist Foundation.

Bibliographische Detailangaben
Veröffentlicht in:The New phytologist. - 1979. - (2024) vom: 24. Okt.
1. Verfasser: Shen, Chao (VerfasserIn)
Weitere Verfasser: Li, Hao, Shu, Lei, Huang, Wen-Zhuan, Zhu, Rui-Liang
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2024
Zugriff auf das übergeordnete Werk:The New phytologist
Schlagworte:Journal Article WGD bryophytes diversification gene duplication land plants phylogenomics rhizoid terrestrialization
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520 |a Large-scale gene duplications (LSGDs) are crucial for evolutionary adaptation and recurrent in vascular plants. However, the role of ancient LSGDs in the terrestrialization and diversification of bryophytes, the second most species-rich group of land plants, remains largely elusive due to limited sampling in bryophytes. Employing the most extensive nuclear gene dataset in bryophytes to date, we reconstructed a time-calibrated phylogenetic tree from 209 species, covering virtually all key bryophyte lineages, for phylogenomic analyses of LSGDs and diversification. We newly identified two ancient LSGDs: one in the most recent common ancestor (MRCA) of extant bryophytes and another in the MRCA of the majority of Jungermanniales s. lato. Duplicated genes from these two LSGDs show significant enrichment in photosynthesis-related processes and structures. Rhizoid-responsive ROOTHAIR DEFECTIVE SIX-LIKE (RSL) genes from ancient LSGDs are present in rhizoidless bryophytes, challenging assumptions about rhizoid absence mechanisms. We highlighted four major diversification rate upshifts, two of which slightly postdated LSGDs, potentially linked to the flourishing of gymnosperms and angiosperms and explaining over 80% of bryophyte diversity. Our findings, supported by extensive bryophyte sampling, highlight the significance of LSGDs in the early terrestrialization and diversification of bryophytes, offering new insights into land plant evolution 
650 4 |a Journal Article 
650 4 |a WGD 
650 4 |a bryophytes 
650 4 |a diversification 
650 4 |a gene duplication 
650 4 |a land plants 
650 4 |a phylogenomics 
650 4 |a rhizoid 
650 4 |a terrestrialization 
700 1 |a Li, Hao  |e verfasserin  |4 aut 
700 1 |a Shu, Lei  |e verfasserin  |4 aut 
700 1 |a Huang, Wen-Zhuan  |e verfasserin  |4 aut 
700 1 |a Zhu, Rui-Liang  |e verfasserin  |4 aut 
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