Natural variation in the adjustment of primary metabolism determines ammonium tolerance in the model grass Brachypodium distachyon

© The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Bibliographische Detailangaben
Veröffentlicht in:Journal of experimental botany. - 1985. - (2024) vom: 18. Sept.
1. Verfasser: De la Peña, Marlon (VerfasserIn)
Weitere Verfasser: Poucet, Théo, Montardit-Tarda, Francesc, Urmeneta, Leyre, Urbano-Gámez, Jose Alberto, Cassan, Cédric, Vega-Mas, Izargi, Catalán, Pilar, Igartua, Ernesto, Gibon, Yves, Gonzalez-Moro, M Begoña, Marino, Daniel
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2024
Zugriff auf das übergeordnete Werk:Journal of experimental botany
Schlagworte:Journal Article Brachypodium Ammonium GWAS glutamate dehydrogenase metabolism natural variation nitrate nitrogen nutritional stress phosphoenolpyruvate carboxylase
LEADER 01000naa a22002652 4500
001 NLM377798266
003 DE-627
005 20240919233218.0
007 cr uuu---uuuuu
008 240919s2024 xx |||||o 00| ||eng c
024 7 |a 10.1093/jxb/erae382  |2 doi 
028 5 2 |a pubmed24n1539.xml 
035 |a (DE-627)NLM377798266 
035 |a (NLM)39292826 
035 |a (PII)erae382 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a De la Peña, Marlon  |e verfasserin  |4 aut 
245 1 0 |a Natural variation in the adjustment of primary metabolism determines ammonium tolerance in the model grass Brachypodium distachyon 
264 1 |c 2024 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Revised 18.09.2024 
500 |a published: Print-Electronic 
500 |a Citation Status Publisher 
520 |a © The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology. 
520 |a Nitrogen (N) fertilization is essential to maximize crop production. However, around half of the applied N is lost to the environment causing water and air pollution and contributing to climate change. Understanding the natural genetic and metabolic basis underlying plants N use efficiency is of great interest to reach an agriculture with less N demand and thus, more sustainable. The study of ammonium (NH4+) nutrition is of particular interest, because it mitigates N losses due to nitrate (NO3-) leaching or denitrification. In this work, we studied Brachypodium distachyon, the model plant for C3 grasses, grown with NH4+ or NO3- supply. We performed gene expression analysis in the root of the B. distachyon reference accession Bd21 and examined the phenotypic variation across 52 natural accessions through analysing plant growth and a panel of 22 metabolic traits in leaf and root. We found that the adjustment of primary metabolism to ammonium nutrition is essential for the natural variation of NH4+ tolerance, notably involving NH4+ assimilation and PEPC activity. Additionally, genome-wide association studies (GWAS) indicated several loci associated with B. distachyon growth and metabolic adaptation to NH4+ nutrition. For instance, we found that the GDH2 gene was associated with the induction of root GDH activity under NH4+ nutrition and that two genes encoding malic enzyme were associated with leaf PEPC activity. Altogether, our work underlines the value of natural variation and the key role of primary metabolism to improve NH4+ tolerance 
650 4 |a Journal Article 
650 4 |a Brachypodium 
650 4 |a Ammonium 
650 4 |a GWAS 
650 4 |a glutamate dehydrogenase 
650 4 |a metabolism 
650 4 |a natural variation 
650 4 |a nitrate 
650 4 |a nitrogen 
650 4 |a nutritional stress 
650 4 |a phosphoenolpyruvate carboxylase 
700 1 |a Poucet, Théo  |e verfasserin  |4 aut 
700 1 |a Montardit-Tarda, Francesc  |e verfasserin  |4 aut 
700 1 |a Urmeneta, Leyre  |e verfasserin  |4 aut 
700 1 |a Urbano-Gámez, Jose Alberto  |e verfasserin  |4 aut 
700 1 |a Cassan, Cédric  |e verfasserin  |4 aut 
700 1 |a Vega-Mas, Izargi  |e verfasserin  |4 aut 
700 1 |a Catalán, Pilar  |e verfasserin  |4 aut 
700 1 |a Igartua, Ernesto  |e verfasserin  |4 aut 
700 1 |a Gibon, Yves  |e verfasserin  |4 aut 
700 1 |a Gonzalez-Moro, M Begoña  |e verfasserin  |4 aut 
700 1 |a Marino, Daniel  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t Journal of experimental botany  |d 1985  |g (2024) vom: 18. Sept.  |w (DE-627)NLM098182706  |x 1460-2431  |7 nnns 
773 1 8 |g year:2024  |g day:18  |g month:09 
856 4 0 |u http://dx.doi.org/10.1093/jxb/erae382  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_350 
951 |a AR 
952 |j 2024  |b 18  |c 09