Genome-wide analysis of the AP2/ERF gene family in Pennisetum glaucum and the negative role of PgRAV_01 in drought tolerance

Copyright © 2024. Published by Elsevier Masson SAS.

Bibliographische Detailangaben
Veröffentlicht in:Plant physiology and biochemistry : PPB. - 1991. - 216(2024) vom: 07. Sept., Seite 109112
1. Verfasser: Wang, Yin-Hua (VerfasserIn)
Weitere Verfasser: Zhao, Bi-Yao, Ye, Xing, Du, Juan, Song, Jian-Ling, Wang, Wen-Jing, Huang, Xiao-Ling, Ouyang, Kun-Xi, Zhang, Xiang-Qian, Liao, Fei-Xiong, Zhong, Tian-Xiu
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2024
Zugriff auf das übergeordnete Werk:Plant physiology and biochemistry : PPB
Schlagworte:Journal Article AP2/ERF family Drought and heat stress Expression analysis Pennisetum glaucum PgRAV_01
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520 |a APETALA2/ethylene-responsive (AP2/ERF) plays crucial roles in resisting diverse stresses and in regulating plant growth and development. However, little is known regarding the structure and function of the AP2/ERF genes in pearl millet (Pennisetum glaucum). The AP2/ERF gene family may be involved in the development and maintenance of P. glaucum resilience to abiotic stresses, central to its role as a vital forage and cereal crop. In this study, PgAP2/ERF family members were identified and comprehensive bioinformatics analyses were performed, including determination of phylogenetic relationships, gene structures, conserved motifs, chromosomal localization, gene duplication, expression pattern, protein interaction network, and functional characterization of PgRAV_01 (Related to ABI3/VP1). In total, 78 PgAP2/ERF members were identified in the P. glaucum genome and classified into five subfamilies: AP2, ERF, DREB, RAV, and soloist. Members within the same clade of the PgAP2/ERF family showed similar gene structures and motif compositions. Six duplication events were identified in the PgAP2/ERF family; calculation of Ka/Ks values showed that purification selection dominated the evolution of PgAP2/ERFs. Subsequently, a potential interaction network of PgAP2/ERFs was generated to predict the interaction relationships. Additionally, abiotic stress expression analysis showed that most PgAP2/ERFs were induced in response to drought and heat stresses. Furthermore, overexpression of PgRAV_01 negatively regulated drought tolerance in Nicotiana benthamiana by reducing its antioxidant capacity and osmotic adjustment. Taken together, these results provide valuable insights into the characteristics and functions of PgAP2/ERF genes, with implications for abiotic stress tolerance, and will ultimately contribute to the genetic improvement of cereal crop breeding 
650 4 |a Journal Article 
650 4 |a AP2/ERF family 
650 4 |a Drought and heat stress 
650 4 |a Expression analysis 
650 4 |a Pennisetum glaucum 
650 4 |a PgRAV_01 
700 1 |a Zhao, Bi-Yao  |e verfasserin  |4 aut 
700 1 |a Ye, Xing  |e verfasserin  |4 aut 
700 1 |a Du, Juan  |e verfasserin  |4 aut 
700 1 |a Song, Jian-Ling  |e verfasserin  |4 aut 
700 1 |a Wang, Wen-Jing  |e verfasserin  |4 aut 
700 1 |a Huang, Xiao-Ling  |e verfasserin  |4 aut 
700 1 |a Ouyang, Kun-Xi  |e verfasserin  |4 aut 
700 1 |a Zhang, Xiang-Qian  |e verfasserin  |4 aut 
700 1 |a Liao, Fei-Xiong  |e verfasserin  |4 aut 
700 1 |a Zhong, Tian-Xiu  |e verfasserin  |4 aut 
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856 4 0 |u http://dx.doi.org/10.1016/j.plaphy.2024.109112  |3 Volltext 
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