Temperature effects on the branching dynamics in the model ambimodal (6 + 4)/(4 + 2) intramolecular cycloaddition reaction

© 2024 The Author(s). Journal of Computational Chemistry published by Wiley Periodicals LLC.

Bibliographische Detailangaben
Veröffentlicht in:Journal of computational chemistry. - 1984. - 45(2024), 32 vom: 15. Dez., Seite 2778-2785
1. Verfasser: Murakami, Tatsuhiro (VerfasserIn)
Weitere Verfasser: Hayashi, Daiki, Kikuma, Yuya, Yamaki, Keita, Takayanagi, Toshiyuki
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2024
Zugriff auf das übergeordnete Werk:Journal of computational chemistry
Schlagworte:Journal Article GFN2‐xTB ambimodal transition state bifurcation dynamics free‐energy curve ring‐polymer molecular dynamics
Beschreibung
Zusammenfassung:© 2024 The Author(s). Journal of Computational Chemistry published by Wiley Periodicals LLC.
C14H20 (tetradecapentaene) is a simple model system exhibiting post transition-state behavior, wherein both the (6 + 4) and (4 + 2) cycloaddition products are formed from one ambimocal transition state structure. We studied the bifurcation dynamics starting from the two ambimodal transition state structures, the chair-form and boat-form, using the quasi-classical trajectory, classical molecular dynamics, and ring-polymer molecular dynamics methods on the parameter-optimized semiempirical GFN2-xTB potential energy surface. It was found that the calculated branching fractions differ between the chair-form and boat-form due to the different nature in the IRC pathways. We also investigated the effects of temperature on bifurcation dynamics and found that, at higher temperatures, trajectories stay longer in the intermediate region of the potential energy surface
Beschreibung:Date Revised 08.11.2024
published: Print-Electronic
Citation Status PubMed-not-MEDLINE
ISSN:1096-987X
DOI:10.1002/jcc.27484