Genome-wide association studies and transcriptomics reveal mechanisms explaining the diversity of wheat root responses to nutrient availability

© The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissionsoup.com.

Bibliographische Detailangaben
Veröffentlicht in:Journal of experimental botany. - 1985. - (2024) vom: 29. März
1. Verfasser: Ahmad, Suhaib (VerfasserIn)
Weitere Verfasser: Khan, Hafiza Madeeha, Nawaz, Amjad, Samad, Muhammad Abdul, Cho, Huikyong, Sarfraz, Hira, Aziz, Yasir, Rouached, Hatem, Shahzad, Zaigham
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2024
Zugriff auf das übergeordnete Werk:Journal of experimental botany
Schlagworte:Journal Article TaHAK4 GWAS Nutrient availability Reactive Oxygen Species Root plasticity Transcriptomics Wheat
LEADER 01000caa a22002652c 4500
001 NLM37040923X
003 DE-627
005 20250306003232.0
007 cr uuu---uuuuu
008 240330s2024 xx |||||o 00| ||eng c
024 7 |a 10.1093/jxb/erae141  |2 doi 
028 5 2 |a pubmed25n1234.xml 
035 |a (DE-627)NLM37040923X 
035 |a (NLM)38551389 
035 |a (PII)erae141 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Ahmad, Suhaib  |e verfasserin  |4 aut 
245 1 0 |a Genome-wide association studies and transcriptomics reveal mechanisms explaining the diversity of wheat root responses to nutrient availability 
264 1 |c 2024 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Revised 29.03.2024 
500 |a published: Print-Electronic 
500 |a Citation Status Publisher 
520 |a © The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissionsoup.com. 
520 |a Nutrient availability profoundly influences plant root system architecture, which critically determines crop productivity. While Arabidopsis has provided important insights into the genetic responses to nutrient deficiency, translating this knowledge to crops, particularly wheat, remains a subject of inquiry. Here, examining a diverse wheat population under varying nitrogen (N), phosphorus (P), potassium (K), and iron (Fe) levels, we uncover a spectrum of root responses, spanning from growth inhibition to stimulation, highlighting genotype-specific strategies. Furthermore, we reveal a nuanced interplay between macronutrient deficiency (N, P, and K) and Fe availability, emphasizing the central role of Fe in modulating root architecture. Through genome-wide association mapping, we identify 11 quantitative trait loci underlying root traits under varying nutrient availabilities, including homologous genes previously validated in Arabidopsis, supporting our findings. In addition, utilizing transcriptomics, ROS imaging, and antioxidant treatment, we uncover that wheat root growth inhibition by nutrient deficiency is attributed to ROS accumulation, akin to the role of ROS in governing Arabidopsis root responses to nutrient deficiency. Therefore, our study reveals the conservation of molecular and physiological mechanisms between Arabidopsis and wheat to adjust root growth to nutrient availability, paving the way for targeted crop improvement strategies aimed at increasing nutrient use efficiency 
650 4 |a Journal Article 
650 4 |a TaHAK4 
650 4 |a GWAS 
650 4 |a Nutrient availability 
650 4 |a Reactive Oxygen Species 
650 4 |a Root plasticity 
650 4 |a Transcriptomics 
650 4 |a Wheat 
700 1 |a Khan, Hafiza Madeeha  |e verfasserin  |4 aut 
700 1 |a Nawaz, Amjad  |e verfasserin  |4 aut 
700 1 |a Samad, Muhammad Abdul  |e verfasserin  |4 aut 
700 1 |a Cho, Huikyong  |e verfasserin  |4 aut 
700 1 |a Sarfraz, Hira  |e verfasserin  |4 aut 
700 1 |a Aziz, Yasir  |e verfasserin  |4 aut 
700 1 |a Rouached, Hatem  |e verfasserin  |4 aut 
700 1 |a Shahzad, Zaigham  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t Journal of experimental botany  |d 1985  |g (2024) vom: 29. März  |w (DE-627)NLM098182706  |x 1460-2431  |7 nnas 
773 1 8 |g year:2024  |g day:29  |g month:03 
856 4 0 |u http://dx.doi.org/10.1093/jxb/erae141  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_350 
951 |a AR 
952 |j 2024  |b 29  |c 03