SCR106 splicing factor modulates abiotic stress responses by maintaining RNA splicing in rice

© The Author(s) 2023. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Bibliographische Detailangaben
Veröffentlicht in:Journal of experimental botany. - 1985. - 75(2024), 3 vom: 02. Feb., Seite 802-818
1. Verfasser: Alhabsi, Abdulrahman (VerfasserIn)
Weitere Verfasser: Butt, Haroon, Kirschner, Gwendolyn K, Blilou, Ikram, Mahfouz, Magdy M
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2024
Zugriff auf das übergeordnete Werk:Journal of experimental botany
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Abiotic stress SR proteins alternative splicing genome engineering pre-mRNA splicing RNA Precursors RNA Splicing Factors
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520 |a © The Author(s) 2023. Published by Oxford University Press on behalf of the Society for Experimental Biology. 
520 |a Plants employ sophisticated molecular machinery to fine-tune their responses to growth, developmental, and stress cues. Gene expression influences plant cellular responses through regulatory processes such as transcription and splicing. Pre-mRNA is alternatively spliced to increase the genome coding potential and further regulate expression. Serine/arginine-rich (SR) proteins, a family of pre-mRNA splicing factors, recognize splicing cis-elements and regulate both constitutive and alternative splicing. Several studies have reported SR protein genes in the rice genome, subdivided into six subfamilies based on their domain structures. Here, we identified a new splicing factor in rice with an RNA recognition motif (RRM) and SR-dipeptides, which is related to the SR proteins, subfamily SC. OsSCR106 regulates pre-mRNA splicing under abiotic stress conditions. It localizes to the nuclear speckles, a major site for pre-mRNA splicing in the cell. The loss-of-function scr106 mutant is hypersensitive to salt, abscisic acid, and low-temperature stress, and harbors a developmental abnormality indicated by the shorter length of the shoot and root. The hypersensitivity to stress phenotype was rescued by complementation using OsSCR106 fused behind its endogenous promoter. Global gene expression and genome-wide splicing analysis in wild-type and scr106 seedlings revealed that OsSCR106 regulates its targets, presumably through regulating the alternative 3'-splice site. Under salt stress conditions, we identified multiple splice isoforms regulated by OsSCR106. Collectively, our results suggest that OsSCR106 is an important splicing factor that plays a crucial role in accurate pre-mRNA splicing and regulates abiotic stress responses in plants 
650 4 |a Journal Article 
650 4 |a Research Support, Non-U.S. Gov't 
650 4 |a Abiotic stress 
650 4 |a SR proteins 
650 4 |a alternative splicing 
650 4 |a genome engineering 
650 4 |a pre-mRNA splicing 
650 7 |a RNA Precursors  |2 NLM 
650 7 |a RNA Splicing Factors  |2 NLM 
700 1 |a Butt, Haroon  |e verfasserin  |4 aut 
700 1 |a Kirschner, Gwendolyn K  |e verfasserin  |4 aut 
700 1 |a Blilou, Ikram  |e verfasserin  |4 aut 
700 1 |a Mahfouz, Magdy M  |e verfasserin  |4 aut 
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773 1 8 |g volume:75  |g year:2024  |g number:3  |g day:02  |g month:02  |g pages:802-818 
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