A Frontline, Rapid, Nucleic Acid-Based Fusarium circinatum Detection System Using CRISPR/Cas12a Combined with Recombinase Polymerase Amplification

Pitch canker caused by the fungus Fusarium circinatum is a damaging disease that affects pines in Europe, South Africa, and North America in both the southeast and west coast of the United States. Several countries, including China, have listed F. circinatum as a quarantine pathogen. Timely detectio...

Ausführliche Beschreibung

Bibliographische Detailangaben
Veröffentlicht in:Plant disease. - 1997. - 107(2023), 6 vom: 08. Juni, Seite 1902-1910
1. Verfasser: Chen, Zhenpeng (VerfasserIn)
Weitere Verfasser: Yang, Xiao, Xia, Hongming, Wu, Cuiping, Yang, Jing, Dai, Tingting
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2023
Zugriff auf das übergeordnete Werk:Plant disease
Schlagworte:Journal Article CRISPR/Cas12a Fusarium circinatum disease diagnosis pine pitch canker plant destroyers rapid detection Recombinases DNA 9007-49-2
LEADER 01000naa a22002652 4500
001 NLM349930686
003 DE-627
005 20231226043811.0
007 cr uuu---uuuuu
008 231226s2023 xx |||||o 00| ||eng c
024 7 |a 10.1094/PDIS-05-22-1234-RE  |2 doi 
028 5 2 |a pubmed24n1166.xml 
035 |a (DE-627)NLM349930686 
035 |a (NLM)36480733 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Chen, Zhenpeng  |e verfasserin  |4 aut 
245 1 2 |a A Frontline, Rapid, Nucleic Acid-Based Fusarium circinatum Detection System Using CRISPR/Cas12a Combined with Recombinase Polymerase Amplification 
264 1 |c 2023 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Completed 28.06.2023 
500 |a Date Revised 28.06.2023 
500 |a published: Print-Electronic 
500 |a Citation Status MEDLINE 
520 |a Pitch canker caused by the fungus Fusarium circinatum is a damaging disease that affects pines in Europe, South Africa, and North America in both the southeast and west coast of the United States. Several countries, including China, have listed F. circinatum as a quarantine pathogen. Timely detection, an important pillar of the quarantine effort, can efficiently prevent the introduction of F. circinatum into new areas or facilitate management and eradication strategies in already infested sites. In this study, we developed an F. circinatum detection technique based on a combination of recombinase polymerase amplification (RPA) with CRISPR/Cas12a technology (termed RPA-CRISPR/Cas12a). After obtaining DNA, this novel method can be utilized for the molecular identification of F. circinatum using the naked eye and can specifically detect F. circinatum at DNA concentrations as low as 200 fg within 30 min at 37°C. The system is sensitive for both standard laboratory samples and samples from the field. In summary, we have developed a simple, rapid, sensitive, unaided-eye visualization, RPA-CRISPR/Cas12a-based detection system for the molecular identification of F. circinatum that does not require technical expertise or expensive ancillary equipment 
650 4 |a Journal Article 
650 4 |a CRISPR/Cas12a 
650 4 |a Fusarium circinatum 
650 4 |a disease diagnosis 
650 4 |a pine pitch canker 
650 4 |a plant destroyers 
650 4 |a rapid detection 
650 7 |a Recombinases  |2 NLM 
650 7 |a DNA  |2 NLM 
650 7 |a 9007-49-2  |2 NLM 
700 1 |a Yang, Xiao  |e verfasserin  |4 aut 
700 1 |a Xia, Hongming  |e verfasserin  |4 aut 
700 1 |a Wu, Cuiping  |e verfasserin  |4 aut 
700 1 |a Yang, Jing  |e verfasserin  |4 aut 
700 1 |a Dai, Tingting  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t Plant disease  |d 1997  |g 107(2023), 6 vom: 08. Juni, Seite 1902-1910  |w (DE-627)NLM098181742  |x 0191-2917  |7 nnns 
773 1 8 |g volume:107  |g year:2023  |g number:6  |g day:08  |g month:06  |g pages:1902-1910 
856 4 0 |u http://dx.doi.org/10.1094/PDIS-05-22-1234-RE  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_350 
951 |a AR 
952 |d 107  |j 2023  |e 6  |b 08  |c 06  |h 1902-1910