Transcriptomic and weighted gene co-expression network analysis of tropic and temperate maize inbred lines recovering from heat stress

Copyright © 2022 Elsevier B.V. All rights reserved.

Bibliographische Detailangaben
Veröffentlicht in:Plant science : an international journal of experimental plant biology. - 1985. - 327(2023) vom: 01. Feb., Seite 111538
1. Verfasser: Long, Yun (VerfasserIn)
Weitere Verfasser: Qin, Qianqian, Zhang, Jiajun, Zhu, Zhan, Liu, Yin, Gu, Longjiang, Jiang, Haiyang, Si, Weina
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2023
Zugriff auf das übergeordnete Werk:Plant science : an international journal of experimental plant biology
Schlagworte:Journal Article Heat stress Hub gene Maize Transcriptome Weighted gene co-expression analysis
LEADER 01000naa a22002652 4500
001 NLM349368090
003 DE-627
005 20231226042448.0
007 cr uuu---uuuuu
008 231226s2023 xx |||||o 00| ||eng c
024 7 |a 10.1016/j.plantsci.2022.111538  |2 doi 
028 5 2 |a pubmed24n1164.xml 
035 |a (DE-627)NLM349368090 
035 |a (NLM)36423743 
035 |a (PII)S0168-9452(22)00363-6 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Long, Yun  |e verfasserin  |4 aut 
245 1 0 |a Transcriptomic and weighted gene co-expression network analysis of tropic and temperate maize inbred lines recovering from heat stress 
264 1 |c 2023 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Completed 17.01.2023 
500 |a Date Revised 17.01.2023 
500 |a published: Print-Electronic 
500 |a Citation Status MEDLINE 
520 |a Copyright © 2022 Elsevier B.V. All rights reserved. 
520 |a Heat stress (HS) causes imbalance of cellular homeostasis, growth impairment and extensively yield loss in crop production. In the present study, the tropic maize inbred CIMBL55 showed more thermotolerance than the maize temperate inbred B73, with less leaf damage rate and ROS accumulation. Transcriptome profiling of CIMBL55 and B73 upon (exposing at 45 ℃ for 0, 1, and 6 h) and post (recovering at 28 ℃ for 1 and 6 h) HS were further assessed and a total of 20204 DEGs were identified. Functional annotation revealed that HS activated unfolded protein response in endoplasmic reticulum in both two inbreds. Moreover, in CIMBL55, far more primary and secondary metabolism pathways were transcriptional altered. Afterwards, weighted gene co-expression analysis grouped all expressed genes into eighteen co-expressed modules. Four HS responsive and four CIMBL55 recovery-related modules were subsequently identified. Highly connected genes (hub genes) in these modules were characterized as transcription factors, heat shock proteins, Ca2+ signaling related genes and various enzymes. Moreover, one hub gene, ZmHsftf13 was verified to positively regulate thermotolerance by heterologous expressing in Arabidopsis and its Mu insertion mutant. The present research provides promising genes related to HS response in maize and is of great significance for breeding 
650 4 |a Journal Article 
650 4 |a Heat stress 
650 4 |a Hub gene 
650 4 |a Maize 
650 4 |a Transcriptome 
650 4 |a Weighted gene co-expression analysis 
700 1 |a Qin, Qianqian  |e verfasserin  |4 aut 
700 1 |a Zhang, Jiajun  |e verfasserin  |4 aut 
700 1 |a Zhu, Zhan  |e verfasserin  |4 aut 
700 1 |a Liu, Yin  |e verfasserin  |4 aut 
700 1 |a Gu, Longjiang  |e verfasserin  |4 aut 
700 1 |a Jiang, Haiyang  |e verfasserin  |4 aut 
700 1 |a Si, Weina  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t Plant science : an international journal of experimental plant biology  |d 1985  |g 327(2023) vom: 01. Feb., Seite 111538  |w (DE-627)NLM098174193  |x 1873-2259  |7 nnns 
773 1 8 |g volume:327  |g year:2023  |g day:01  |g month:02  |g pages:111538 
856 4 0 |u http://dx.doi.org/10.1016/j.plantsci.2022.111538  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_350 
951 |a AR 
952 |d 327  |j 2023  |b 01  |c 02  |h 111538