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|a 10.1094/PDIS-08-22-1815-A
|2 doi
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|a DE-627
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|a eng
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|a Yang, Jingjing
|e verfasserin
|4 aut
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|a Whole-Genome Sequencing of Fusarium oxysporum f. sp. cucumerinum Strain Race-4 Infecting Cucumber in China
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|c 2023
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|a Text
|b txt
|2 rdacontent
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|a ƒaComputermedien
|b c
|2 rdamedia
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|a ƒa Online-Ressource
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|2 rdacarrier
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|a Date Completed 01.05.2023
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|a Date Revised 01.05.2023
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|a published: Print-Electronic
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|a Citation Status MEDLINE
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|a Fusarium oxysporum f. sp. cucumerinum, which causes root and vascular wilting, is one of the most devastating diseases infecting cucumber. Here, we report the first genome resource with high-quality assembly for F. oxysporum f. sp. cucumerinum strain Race-4, which is primarily endemic to China. The genome was 59.11 Mb in size and consisted of 48 scaffolds with an N50 of 3.87 Mb using PacBio long reads (301.77×) sequencing, and encodes 14,898 proteins from analyzing RNA-seq data. Gene annotations identified pathogen-host interaction genes, fungal virulence factors, secreted proteins, transcription factors, and secondary metabolite biosynthesis gene. Moreover, functional genes reported in previous studies were also identified in the genome of Race-4. These genes and genome resource may play important roles in understanding F. oxysporum f. sp. cucumerinum-cucumber interactions and will be useful for further research
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|a Journal Article
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|a Fusarium oxysporum f. sp. cucumerinum
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|a cucumber Fusarium wilt
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|a gene annotation
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|a genome assembly
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|a race-4
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|a Virulence Factors
|2 NLM
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|a Mao, Aijun
|e verfasserin
|4 aut
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|a Zhang, Jian
|e verfasserin
|4 aut
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1 |
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|a Zhang, Xiaofei
|e verfasserin
|4 aut
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|a Xia, Changxuan
|e verfasserin
|4 aut
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|a Zhao, Hong
|e verfasserin
|4 aut
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1 |
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|a Wang, Yixin
|e verfasserin
|4 aut
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|a Wen, Changlong
|e verfasserin
|4 aut
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|a Liu, Hui
|e verfasserin
|4 aut
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|a Wang, Qian
|e verfasserin
|4 aut
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|i Enthalten in
|t Plant disease
|d 1997
|g 107(2023), 4 vom: 15. Apr., Seite 1210-1213
|w (DE-627)NLM098181742
|x 0191-2917
|7 nnas
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|g volume:107
|g year:2023
|g number:4
|g day:15
|g month:04
|g pages:1210-1213
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|u http://dx.doi.org/10.1094/PDIS-08-22-1815-A
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