MedChemLens : An Interactive Visual Tool to Support Direction Selection in Interdisciplinary Experimental Research of Medicinal Chemistry

Interdisciplinary experimental science (e.g., medicinal chemistry) refers to the disciplines that integrate knowledge from different scientific backgrounds and involve experiments in the research process. Deciding "in what direction to proceed" is critical for the success of the research i...

Ausführliche Beschreibung

Bibliographische Detailangaben
Veröffentlicht in:IEEE transactions on visualization and computer graphics. - 1996. - 29(2023), 1 vom: 27. Jan., Seite 63-73
1. Verfasser: Shi, Chuhan (VerfasserIn)
Weitere Verfasser: Nie, Fei, Hu, Yicheng, Xu, Yige, Chen, Lei, Ma, Xiaojuan, Luo, Qiong
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2023
Zugriff auf das übergeordnete Werk:IEEE transactions on visualization and computer graphics
Schlagworte:Journal Article Research Support, Non-U.S. Gov't
LEADER 01000caa a22002652c 4500
001 NLM346821770
003 DE-627
005 20250303214038.0
007 cr uuu---uuuuu
008 231226s2023 xx |||||o 00| ||eng c
024 7 |a 10.1109/TVCG.2022.3209434  |2 doi 
028 5 2 |a pubmed25n1155.xml 
035 |a (DE-627)NLM346821770 
035 |a (NLM)36166547 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Shi, Chuhan  |e verfasserin  |4 aut 
245 1 0 |a MedChemLens  |b An Interactive Visual Tool to Support Direction Selection in Interdisciplinary Experimental Research of Medicinal Chemistry 
264 1 |c 2023 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Completed 06.04.2023 
500 |a Date Revised 03.05.2023 
500 |a published: Print-Electronic 
500 |a Citation Status MEDLINE 
520 |a Interdisciplinary experimental science (e.g., medicinal chemistry) refers to the disciplines that integrate knowledge from different scientific backgrounds and involve experiments in the research process. Deciding "in what direction to proceed" is critical for the success of the research in such disciplines, since the time, money, and resource costs of the subsequent research steps depend largely on this decision. However, such a direction identification task is challenging in that researchers need to integrate information from large-scale, heterogeneous materials from all associated disciplines and summarize the related publications of which the core contributions are often showcased in diverse formats. The task also requires researchers to estimate the feasibility and potential in future experiments in the selected directions. In this work, we selected medicinal chemistry as a case and presented an interactive visual tool, MedChemLens, to assist medicinal chemists in choosing their intended directions of research. This task is also known as drug target (i.e., disease-linked proteins) selection. Given a candidate target name, MedChemLens automatically extracts the molecular features of drug compounds from chemical papers and clinical trial records, organizes them based on the drug structures, and interactively visualizes factors concerning subsequent experiments. We evaluated MedChemLens through a within-subjects study (N=16). Compared with the control condition (i.e., unrestricted online search without using our tool), participants who only used MedChemLens reported faster search, better-informed selections, higher confidence in their selections, and lower cognitive load 
650 4 |a Journal Article 
650 4 |a Research Support, Non-U.S. Gov't 
700 1 |a Nie, Fei  |e verfasserin  |4 aut 
700 1 |a Hu, Yicheng  |e verfasserin  |4 aut 
700 1 |a Xu, Yige  |e verfasserin  |4 aut 
700 1 |a Chen, Lei  |e verfasserin  |4 aut 
700 1 |a Ma, Xiaojuan  |e verfasserin  |4 aut 
700 1 |a Luo, Qiong  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t IEEE transactions on visualization and computer graphics  |d 1996  |g 29(2023), 1 vom: 27. Jan., Seite 63-73  |w (DE-627)NLM098269445  |x 1941-0506  |7 nnas 
773 1 8 |g volume:29  |g year:2023  |g number:1  |g day:27  |g month:01  |g pages:63-73 
856 4 0 |u http://dx.doi.org/10.1109/TVCG.2022.3209434  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_350 
951 |a AR 
952 |d 29  |j 2023  |e 1  |b 27  |c 01  |h 63-73