Arabidopsis latent virus 1, a comovirus widely spread in Arabidopsis thaliana collections

© 2022 The Authors. New Phytologist © 2022 New Phytologist Foundation.

Bibliographische Detailangaben
Veröffentlicht in:The New phytologist. - 1979. - 237(2023), 4 vom: 08. Feb., Seite 1146-1153
1. Verfasser: Verhoeven, Ava (VerfasserIn)
Weitere Verfasser: Kloth, Karen J, Kupczok, Anne, Oymans, Geert H, Damen, Janna, Rijnsburger, Karin, Jiang, Zhang, Deelen, Cas, Sasidharan, Rashmi, van Zanten, Martijn, van der Vlugt, René A A
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2023
Zugriff auf das übergeordnete Werk:The New phytologist
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Arabidopsis thaliana Arabidopsis latent virus 1 (ArLV1) RNA sequencing comovirus drought resilience sequence read archives RNA, Viral
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520 |a Transcriptome studies of Illumina RNA-Seq datasets of different Arabidopsis thaliana natural accessions and T-DNA mutants revealed the presence of two virus-like RNA sequences which showed the typical two-segmented genome characteristics of a comovirus. This comovirus did not induce any visible symptoms in infected A. thaliana plants cultivated under standard laboratory conditions. Hence it was named Arabidopsis latent virus 1 (ArLV1). Virus infectivity in A. thaliana plants was confirmed by quantitative reverse transcription polymerase chain reaction, transmission electron microscopy and mechanical inoculation. Arabidopsis latent virus 1 can also mechanically infect Nicotiana benthamiana, causing distinct mosaic symptoms. A bioinformatics investigation of A. thaliana RNA-Seq repositories, including nearly 6500 Sequence Read Archives (SRAs) in the NCBI SRA database, revealed the presence of ArLV1 in 25% of all archived natural A. thaliana accessions and in 8.5% of all analyzed SRAs. Arabidopsis latent virus 1 could also be detected in A. thaliana plants collected from the wild. Arabidopsis latent virus 1 is highly seed-transmissible with up to 40% incidence on the progeny derived from infected A. thaliana plants. This has probably led to a worldwide distribution in the model plant A. thaliana with as yet unknown effects on plant performance in a substantial number of studies 
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650 4 |a Research Support, Non-U.S. Gov't 
650 4 |a Arabidopsis thaliana 
650 4 |a Arabidopsis latent virus 1 (ArLV1) 
650 4 |a RNA sequencing 
650 4 |a comovirus 
650 4 |a drought resilience 
650 4 |a sequence read archives 
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700 1 |a Kloth, Karen J  |e verfasserin  |4 aut 
700 1 |a Kupczok, Anne  |e verfasserin  |4 aut 
700 1 |a Oymans, Geert H  |e verfasserin  |4 aut 
700 1 |a Damen, Janna  |e verfasserin  |4 aut 
700 1 |a Rijnsburger, Karin  |e verfasserin  |4 aut 
700 1 |a Jiang, Zhang  |e verfasserin  |4 aut 
700 1 |a Deelen, Cas  |e verfasserin  |4 aut 
700 1 |a Sasidharan, Rashmi  |e verfasserin  |4 aut 
700 1 |a van Zanten, Martijn  |e verfasserin  |4 aut 
700 1 |a van der Vlugt, René A A  |e verfasserin  |4 aut 
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