Model-based plant phenomics on morphological traits using morphometric descriptors

Copyright © 2022 by JAPANESE SOCIETY OF BREEDING.

Détails bibliographiques
Publié dans:Breeding science. - 1998. - 72(2022), 1 vom: 01. März, Seite 19-30
Auteur principal: Noshita, Koji (Auteur)
Autres auteurs: Murata, Hidekazu, Kirie, Shiryu
Format: Article en ligne
Langue:English
Publié: 2022
Accès à la collection:Breeding science
Sujets:Journal Article morphometrics plant phenotyping theoretical morphology topological data analysis
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520 |a The morphological traits of plants contribute to many important functional features such as radiation interception, lodging tolerance, gas exchange efficiency, spatial competition between individuals and/or species, and disease resistance. Although the importance of plant phenotyping techniques is increasing with advances in molecular breeding strategies, there are barriers to its advancement, including the gap between measured data and phenotypic values, low quantitativity, and low throughput caused by the lack of models for representing morphological traits. In this review, we introduce morphological descriptors that can be used for phenotyping plant morphological traits. Geometric morphometric approaches pave the way to a general-purpose method applicable to single units. Hierarchical structures composed of an indefinite number of multiple elements, which is often observed in plants, can be quantified in terms of their multi-scale topological characteristics using topological data analysis. Theoretical morphological models capture specific anatomical structures, if recognized. These morphological descriptors provide us with the advantages of model-based plant phenotyping, including robust quantification of limited datasets. Moreover, we discuss the future possibilities that a system of model-based measurement and model refinement would solve the lack of morphological models and the difficulties in scaling out the phenotyping processes 
650 4 |a Journal Article 
650 4 |a morphometrics 
650 4 |a plant phenotyping 
650 4 |a theoretical morphology 
650 4 |a topological data analysis 
700 1 |a Murata, Hidekazu  |e verfasserin  |4 aut 
700 1 |a Kirie, Shiryu  |e verfasserin  |4 aut 
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773 1 8 |g volume:72  |g year:2022  |g number:1  |g day:01  |g month:03  |g pages:19-30 
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