TXM-Sandbox : an open-source software for transmission X-ray microscopy data analysis

open access.

Bibliographische Detailangaben
Veröffentlicht in:Journal of synchrotron radiation. - 1994. - 29(2022), Pt 1 vom: 01. Jan., Seite 266-275
1. Verfasser: Xiao, Xianghui (VerfasserIn)
Weitere Verfasser: Xu, Zhengrui, Lin, Feng, Lee, Wah Keat
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2022
Zugriff auf das übergeordnete Werk:Journal of synchrotron radiation
Schlagworte:Journal Article X-ray imaging XANES computer programs data analysis transmission X-ray microscope
LEADER 01000naa a22002652 4500
001 NLM335208428
003 DE-627
005 20231225225329.0
007 cr uuu---uuuuu
008 231225s2022 xx |||||o 00| ||eng c
024 7 |a 10.1107/S1600577521011978  |2 doi 
028 5 2 |a pubmed24n1117.xml 
035 |a (DE-627)NLM335208428 
035 |a (NLM)34985444 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Xiao, Xianghui  |e verfasserin  |4 aut 
245 1 0 |a TXM-Sandbox  |b an open-source software for transmission X-ray microscopy data analysis 
264 1 |c 2022 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Completed 07.01.2022 
500 |a Date Revised 20.01.2022 
500 |a published: Print-Electronic 
500 |a Citation Status MEDLINE 
520 |a open access. 
520 |a A transmission X-ray microscope (TXM) can investigate morphological and chemical information of a tens to hundred micrometre-thick specimen on a length scale of tens to hundreds of nanometres. It has broad applications in material sciences and battery research. TXM data processing is composed of multiple steps. A workflow software has been developed that integrates all the tools required for general TXM data processing and visualization. The software is written in Python and has a graphic user interface in Jupyter Notebook. Users have access to the intermediate analysis results within Jupyter Notebook and have options to insert extra data processing steps in addition to those that are integrated in the software. The software seamlessly integrates ImageJ as its primary image viewer, providing rich image visualization and processing routines. As a guide for users, several TXM specific data analysis issues and examples are also presented 
650 4 |a Journal Article 
650 4 |a X-ray imaging 
650 4 |a XANES 
650 4 |a computer programs 
650 4 |a data analysis 
650 4 |a transmission X-ray microscope 
700 1 |a Xu, Zhengrui  |e verfasserin  |4 aut 
700 1 |a Lin, Feng  |e verfasserin  |4 aut 
700 1 |a Lee, Wah Keat  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t Journal of synchrotron radiation  |d 1994  |g 29(2022), Pt 1 vom: 01. Jan., Seite 266-275  |w (DE-627)NLM09824129X  |x 1600-5775  |7 nnns 
773 1 8 |g volume:29  |g year:2022  |g number:Pt 1  |g day:01  |g month:01  |g pages:266-275 
856 4 0 |u http://dx.doi.org/10.1107/S1600577521011978  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_40 
912 |a GBV_ILN_350 
912 |a GBV_ILN_2005 
951 |a AR 
952 |d 29  |j 2022  |e Pt 1  |b 01  |c 01  |h 266-275