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231225s2020 xx |||||o 00| ||eng c |
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|a 10.1109/TIP.2020.3023795
|2 doi
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|a eng
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|a Javed, Sajid
|e verfasserin
|4 aut
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|a Multiplex Cellular Communities in Multi-Gigapixel Colorectal Cancer Histology Images for Tissue Phenotyping
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|c 2020
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|a Text
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|a ƒaComputermedien
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|a ƒa Online-Ressource
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|a Date Revised 22.02.2024
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|a published: Print-Electronic
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|a Citation Status Publisher
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|a In computational pathology, automated tissue phenotyping in cancer histology images is a fundamental tool for profiling tumor microenvironments. Current tissue phenotyping methods use features derived from image patches which may not carry biological significance. In this work, we propose a novel multiplex cellular community-based algorithm for tissue phenotyping integrating cell-level features within a graph-based hierarchical framework. We demonstrate that such integration offers better performance compared to prior deep learning and texture-based methods as well as to cellular community based methods using uniplex networks. To this end, we construct celllevel graphs using texture, alpha diversity and multi-resolution deep features. Using these graphs, we compute cellular connectivity features which are then employed for the construction of a patch-level multiplex network. Over this network, we compute multiplex cellular communities using a novel objective function. The proposed objective function computes a low-dimensional subspace from each cellular network and subsequently seeks a common low-dimensional subspace using the Grassmann manifold. We evaluate our proposed algorithm on three publicly available datasets for tissue phenotyping, demonstrating a significant improvement over existing state-of-the-art methods
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|a Journal Article
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|a Mahmood, Arif
|e verfasserin
|4 aut
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|a Werghi, Naoufel
|e verfasserin
|4 aut
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|a Benes, Ksenija
|e verfasserin
|4 aut
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|a Rajpoot, Nasir
|e verfasserin
|4 aut
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|i Enthalten in
|t IEEE transactions on image processing : a publication of the IEEE Signal Processing Society
|d 1992
|g PP(2020) vom: 23. Sept.
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|x 1941-0042
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|g volume:PP
|g year:2020
|g day:23
|g month:09
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|u http://dx.doi.org/10.1109/TIP.2020.3023795
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