A clinically validated human capillary blood transcriptome test for global systems biology studies

To prevent and treat chronic diseases, including cancer, a global application of systems biology is needed. We report here a whole blood transcriptome test that needs only 50 μl of capillary (fingerprick) blood. This test is suitable for global applications because the samples are preserved at ambie...

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Veröffentlicht in:BioTechniques. - 1988. - 69(2020), 4 vom: 01. Okt., Seite 289-301
1. Verfasser: Toma, Ryan (VerfasserIn)
Weitere Verfasser: Duval, Nathan, Pelle, Benjamin, Parks, Matthew M, Gopu, Vishakh, Torres, Pedro J, Camacho, Francine R, Shen, Nan, Krishnan, Subha, Hatch, Andrew, Tily, Hal, Perlina, Ally, Banavar, Guruduth, Vuyisich, Momchilo
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2020
Zugriff auf das übergeordnete Werk:BioTechniques
Schlagworte:Journal Article RNA-seq clinically validated population studies systems biology transcriptomics whole blood
Beschreibung
Zusammenfassung:To prevent and treat chronic diseases, including cancer, a global application of systems biology is needed. We report here a whole blood transcriptome test that needs only 50 μl of capillary (fingerprick) blood. This test is suitable for global applications because the samples are preserved at ambient temperature for up to 4 weeks and the RNA preservative inactivates all pathogens, enabling safe transportation. Both the laboratory and bioinformatic steps are automated and performed in a clinical lab, which minimizes batch effects and creates unbiased datasets. Given its clinical testing performance and accessibility to traditionally underrepresented and diverse populations, this test offers a unique ability to reveal molecular mechanisms of disease and enable longitudinal, population-scale studies
Beschreibung:Date Completed 09.08.2021
Date Revised 09.08.2021
published: Print-Electronic
Citation Status MEDLINE
ISSN:1940-9818
DOI:10.2144/btn-2020-0088