Episodic and guanine-cytosine-biased bursts of intragenomic and interspecific synonymous divergence in Ajugoideae (Lamiaceae) mitogenomes

© 2020 The Authors New Phytologist © 2020 New Phytologist Trust.

Bibliographische Detailangaben
Veröffentlicht in:The New phytologist. - 1984. - 228(2020), 3 vom: 01. Nov., Seite 1107-1114
1. Verfasser: Liu, Fang (VerfasserIn)
Weitere Verfasser: Fan, Weishu, Yang, Jun-Bo, Xiang, Chun-Lei, Mower, Jeffrey P, Li, De-Zhu, Zhu, Andan
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2020
Zugriff auf das übergeordnete Werk:The New phytologist
Schlagworte:Journal Article Research Support, Non-U.S. Gov't GC-biased gene conversion RNA editing gene cluster intragenomic variation mitogenomes synonymous divergence Guanine 5Z93L87A1R mehr... Cytosine 8J337D1HZY
LEADER 01000caa a22002652c 4500
001 NLM311375944
003 DE-627
005 20250227111127.0
007 cr uuu---uuuuu
008 231225s2020 xx |||||o 00| ||eng c
024 7 |a 10.1111/nph.16753  |2 doi 
028 5 2 |a pubmed25n1037.xml 
035 |a (DE-627)NLM311375944 
035 |a (NLM)32558926 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Liu, Fang  |e verfasserin  |4 aut 
245 1 0 |a Episodic and guanine-cytosine-biased bursts of intragenomic and interspecific synonymous divergence in Ajugoideae (Lamiaceae) mitogenomes 
264 1 |c 2020 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Completed 14.05.2021 
500 |a Date Revised 14.05.2021 
500 |a published: Print-Electronic 
500 |a Citation Status MEDLINE 
520 |a © 2020 The Authors New Phytologist © 2020 New Phytologist Trust. 
520 |a Synonymous substitution rates in plant mitochondrial genomes vary by orders of magnitude among species, whereas synonymous rates among genes within a genome are generally consistent. Exceptionally, genes within the Ajuga reptans (Lamiaceae) mitochondrial genome exhibit unprecedented intragenomic heterogeneity in synonymous sequence divergence, but the biological mechanisms underlying this rate variation remain unclear. We tracked the origin and evolutionary trajectory of mitochondrial rate variations by dense sampling in Ajugoideae and found differences in the timing and magnitude of rate acceleration for particular genes. The most divergent genes accelerated earlier, retained a high rate across Ajugoideae, and are generally devoid of RNA editing, whereas moderately diverged genes accelerated later and retained relatively higher RNA editing frequency. The acceleration of mutation rates correlates with increased guanine-cytosine (GC) content, suggesting a key role for GC-biased gene conversion and/or repair after the breakage of ancestral gene clusters 
650 4 |a Journal Article 
650 4 |a Research Support, Non-U.S. Gov't 
650 4 |a GC-biased gene conversion 
650 4 |a RNA editing 
650 4 |a gene cluster 
650 4 |a intragenomic variation 
650 4 |a mitogenomes 
650 4 |a synonymous divergence 
650 7 |a Guanine  |2 NLM 
650 7 |a 5Z93L87A1R  |2 NLM 
650 7 |a Cytosine  |2 NLM 
650 7 |a 8J337D1HZY  |2 NLM 
700 1 |a Fan, Weishu  |e verfasserin  |4 aut 
700 1 |a Yang, Jun-Bo  |e verfasserin  |4 aut 
700 1 |a Xiang, Chun-Lei  |e verfasserin  |4 aut 
700 1 |a Mower, Jeffrey P  |e verfasserin  |4 aut 
700 1 |a Li, De-Zhu  |e verfasserin  |4 aut 
700 1 |a Zhu, Andan  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t The New phytologist  |d 1984  |g 228(2020), 3 vom: 01. Nov., Seite 1107-1114  |w (DE-627)NLM09818248X  |x 1469-8137  |7 nnas 
773 1 8 |g volume:228  |g year:2020  |g number:3  |g day:01  |g month:11  |g pages:1107-1114 
856 4 0 |u http://dx.doi.org/10.1111/nph.16753  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_350 
951 |a AR 
952 |d 228  |j 2020  |e 3  |b 01  |c 11  |h 1107-1114