Genomic insights into adaptation to heterogeneous environments for the ancient relictual Circaeaster agrestis (Circaeasteraceae, Ranunculales)

Genomic insights into adaptation to heterogeneous environments for the ancient relictual Circaeaster agrestis (Circaeasteraceae, Ranunculales)

© 2020 The Authors New Phytologist © 2020 New Phytologist Trust.

Bibliographische Detailangaben
Veröffentlicht in:The New phytologist. - 1979. - 228(2020), 1 vom: 10. Okt., Seite 285-301
1. Verfasser: Zhang, Xu (VerfasserIn)
Weitere Verfasser: Sun, Yanxia, Landis, Jacob B, Zhang, Jianwen, Yang, Linsen, Lin, Nan, Zhang, Huajie, Guo, Rui, Li, Lijuan, Zhang, Yonghong, Deng, Tao, Sun, Hang, Wang, Hengchang
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2020
Zugriff auf das übergeordnete Werk:The New phytologist
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Circaeaster agrestis conservation environmental heterogeneity genetic structure local adaptation restriction site-associated DNA sequencing (RAD-seq) temperature variables
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520 |a Investigating the interaction between environmental heterogeneity and local adaptation is critical for understanding the evolutionary history of a species, providing the premise for studying the response of organisms to rapid climate change. However, for most species how exactly the spatial heterogeneity promotes population divergence and how genomic variations contribute to adaptive evolution remain poorly understood. We examine the contributions of geographical and environmental variables to population divergence of the relictual, alpine herb Circaeaster agrestis, as well as the genetic basis of local adaptation using RAD-seq and plastome data. We detected significant genetic structure with an extraordinary disequilibrium of genetic diversity among regions, and signals of isolation-by-distance along with isolation-by-resistance. The populations were estimated to begin diverging in the late Miocene, along with a possible ancestral distribution of the Hengduan Mountains and adjacent regions. Both environmental gradient and redundancy analyses revealed significant association between genetic variation and temperature variables. Genome-environment association analyses identified 16 putatively adaptive loci related mainly to biotic and abiotic stress resistance. Our genome-wide data provide new insights into the important role of environmental heterogeneity in shaping genetic structure, and access the footprints of local adaptation in an ancient relictual species, informing future conservation efforts 
650 4 |a Journal Article 
650 4 |a Research Support, Non-U.S. Gov't 
650 4 |a Circaeaster agrestis 
650 4 |a conservation 
650 4 |a environmental heterogeneity 
650 4 |a genetic structure 
650 4 |a local adaptation 
650 4 |a restriction site-associated DNA sequencing (RAD-seq) 
650 4 |a temperature variables 
700 1 |a Sun, Yanxia  |e verfasserin  |4 aut 
700 1 |a Landis, Jacob B  |e verfasserin  |4 aut 
700 1 |a Zhang, Jianwen  |e verfasserin  |4 aut 
700 1 |a Yang, Linsen  |e verfasserin  |4 aut 
700 1 |a Lin, Nan  |e verfasserin  |4 aut 
700 1 |a Zhang, Huajie  |e verfasserin  |4 aut 
700 1 |a Guo, Rui  |e verfasserin  |4 aut 
700 1 |a Li, Lijuan  |e verfasserin  |4 aut 
700 1 |a Zhang, Yonghong  |e verfasserin  |4 aut 
700 1 |a Deng, Tao  |e verfasserin  |4 aut 
700 1 |a Sun, Hang  |e verfasserin  |4 aut 
700 1 |a Wang, Hengchang  |e verfasserin  |4 aut 
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