Enabling reusability of plant phenomic datasets with MIAPPE 1.1

Enabling reusability of plant phenomic datasets with MIAPPE 1.1

© 2020 The Authors. New Phytologist © 2020 New Phytologist Trust.

Bibliographische Detailangaben
Veröffentlicht in:The New phytologist. - 1979. - 227(2020), 1 vom: 13. Juli, Seite 260-273
1. Verfasser: Papoutsoglou, Evangelia A (VerfasserIn)
Weitere Verfasser: Faria, Daniel, Arend, Daniel, Arnaud, Elizabeth, Athanasiadis, Ioannis N, Chaves, Inês, Coppens, Frederik, Cornut, Guillaume, Costa, Bruno V, Ćwiek-Kupczyńska, Hanna, Droesbeke, Bert, Finkers, Richard, Gruden, Kristina, Junker, Astrid, King, Graham J, Krajewski, Paweł, Lange, Matthias, Laporte, Marie-Angélique, Michotey, Célia, Oppermann, Markus, Ostler, Richard, Poorter, Hendrik, Ramı Rez-Gonzalez, Ricardo, Ramšak, Živa, Reif, Jochen C, Rocca-Serra, Philippe, Sansone, Susanna-Assunta, Scholz, Uwe, Tardieu, François, Uauy, Cristobal, Usadel, Björn, Visser, Richard G F, Weise, Stephan, Kersey, Paul J, Miguel, Célia M, Adam-Blondon, Anne-Françoise, Pommier, Cyril
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2020
Zugriff auf das übergeordnete Werk:The New phytologist
Schlagworte:Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. findability interoperability metadata phenomics plant phenotyping reusability standards
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245 1 0 |a Enabling reusability of plant phenomic datasets with MIAPPE 1.1 
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520 |a Enabling data reuse and knowledge discovery is increasingly critical in modern science, and requires an effort towards standardising data publication practices. This is particularly challenging in the plant phenotyping domain, due to its complexity and heterogeneity. We have produced the MIAPPE 1.1 release, which enhances the existing MIAPPE standard in coverage, to support perennial plants, in structure, through an explicit data model, and in clarity, through definitions and examples. We evaluated MIAPPE 1.1 by using it to express several heterogeneous phenotyping experiments in a range of different formats, to demonstrate its applicability and the interoperability between the various implementations. Furthermore, the extended coverage is demonstrated by the fact that one of the datasets could not have been described under MIAPPE 1.0. MIAPPE 1.1 marks a major step towards enabling plant phenotyping data reusability, thanks to its extended coverage, and especially the formalisation of its data model, which facilitates its implementation in different formats. Community feedback has been critical to this development, and will be a key part of ensuring adoption of the standard 
650 4 |a Journal Article 
650 4 |a Research Support, N.I.H., Extramural 
650 4 |a Research Support, Non-U.S. Gov't 
650 4 |a Research Support, U.S. Gov't, Non-P.H.S. 
650 4 |a findability 
650 4 |a interoperability 
650 4 |a metadata 
650 4 |a phenomics 
650 4 |a plant phenotyping 
650 4 |a reusability 
650 4 |a standards 
700 1 |a Faria, Daniel  |e verfasserin  |4 aut 
700 1 |a Arend, Daniel  |e verfasserin  |4 aut 
700 1 |a Arnaud, Elizabeth  |e verfasserin  |4 aut 
700 1 |a Athanasiadis, Ioannis N  |e verfasserin  |4 aut 
700 1 |a Chaves, Inês  |e verfasserin  |4 aut 
700 1 |a Coppens, Frederik  |e verfasserin  |4 aut 
700 1 |a Cornut, Guillaume  |e verfasserin  |4 aut 
700 1 |a Costa, Bruno V  |e verfasserin  |4 aut 
700 1 |a Ćwiek-Kupczyńska, Hanna  |e verfasserin  |4 aut 
700 1 |a Droesbeke, Bert  |e verfasserin  |4 aut 
700 1 |a Finkers, Richard  |e verfasserin  |4 aut 
700 1 |a Gruden, Kristina  |e verfasserin  |4 aut 
700 1 |a Junker, Astrid  |e verfasserin  |4 aut 
700 1 |a King, Graham J  |e verfasserin  |4 aut 
700 1 |a Krajewski, Paweł  |e verfasserin  |4 aut 
700 1 |a Lange, Matthias  |e verfasserin  |4 aut 
700 1 |a Laporte, Marie-Angélique  |e verfasserin  |4 aut 
700 1 |a Michotey, Célia  |e verfasserin  |4 aut 
700 1 |a Oppermann, Markus  |e verfasserin  |4 aut 
700 1 |a Ostler, Richard  |e verfasserin  |4 aut 
700 1 |a Poorter, Hendrik  |e verfasserin  |4 aut 
700 1 |a Ramı Rez-Gonzalez, Ricardo  |e verfasserin  |4 aut 
700 1 |a Ramšak, Živa  |e verfasserin  |4 aut 
700 1 |a Reif, Jochen C  |e verfasserin  |4 aut 
700 1 |a Rocca-Serra, Philippe  |e verfasserin  |4 aut 
700 1 |a Sansone, Susanna-Assunta  |e verfasserin  |4 aut 
700 1 |a Scholz, Uwe  |e verfasserin  |4 aut 
700 1 |a Tardieu, François  |e verfasserin  |4 aut 
700 1 |a Uauy, Cristobal  |e verfasserin  |4 aut 
700 1 |a Usadel, Björn  |e verfasserin  |4 aut 
700 1 |a Visser, Richard G F  |e verfasserin  |4 aut 
700 1 |a Weise, Stephan  |e verfasserin  |4 aut 
700 1 |a Kersey, Paul J  |e verfasserin  |4 aut 
700 1 |a Miguel, Célia M  |e verfasserin  |4 aut 
700 1 |a Adam-Blondon, Anne-Françoise  |e verfasserin  |4 aut 
700 1 |a Pommier, Cyril  |e verfasserin  |4 aut 
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