HIERARCHICAL ORTHOGONAL MATRIX GENERATION AND MATRIX-VECTOR MULTIPLICATIONS IN RIGID BODY SIMULATIONS
In this paper, we apply the hierarchical modeling technique and study some numerical linear algebra problems arising from the Brownian dynamics simulations of biomolecular systems where molecules are modeled as ensembles of rigid bodies. Given a rigid body p consisting of n beads, the 6×3n transform...
Ausführliche Beschreibung
Bibliographische Detailangaben
| Veröffentlicht in: | SIAM journal on scientific computing : a publication of the Society for Industrial and Applied Mathematics. - 1999. - 40(2018), 3 vom: 20., Seite A1345-A1361
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| 1. Verfasser: |
Fang, Fuhui
(VerfasserIn) |
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| Weitere Verfasser: |
Huang, Jingfang,
Huber, Gary,
McCammon, J Andrew,
Zhang, B O |
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| Format: | Online-Aufsatz
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| Sprache: | English |
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| Veröffentlicht: |
2018
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| Zugriff auf das übergeordnete Werk: | SIAM journal on scientific computing : a publication of the Society for Industrial and Applied Mathematics
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| Schlagworte: | Journal Article
15B10
65F25
65F50
65Y20
70E55
Brownian dynamics
fast algorithms
hierarchical modeling
orthogonal linear algebra |
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