Identification of Soybean mosaic virus Strains by RT-PCR/RFLP Analysis of Cylindrical Inclusion Coding Region

A reverse-transcriptase polymerase chain reaction/restriction fragment length polymorphism (RT-PCR/RFLP) was employed successfully for detection and identification of Soybean mosaic virus (SMV) strains. A primer pair amplifying a 1,385-bp fragment of the cylindrical inclusion (CI) coding region was...

Ausführliche Beschreibung

Bibliographische Detailangaben
Veröffentlicht in:Plant disease. - 1997. - 88(2004), 6 vom: 20. Juni, Seite 641-644
1. Verfasser: Kim, Yul-Ho (VerfasserIn)
Weitere Verfasser: Kim, Ok-Sun, Roh, Jae-Hwan, Moon, Jung-Kyung, Sohn, Soo-In, Lee, Sang-Chul, Lee, Jang-Young
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2004
Zugriff auf das übergeordnete Werk:Plant disease
Schlagworte:Journal Article
LEADER 01000naa a22002652 4500
001 NLM294371478
003 DE-627
005 20231225081334.0
007 cr uuu---uuuuu
008 231225s2004 xx |||||o 00| ||eng c
024 7 |a 10.1094/PDIS.2004.88.6.641  |2 doi 
028 5 2 |a pubmed24n0981.xml 
035 |a (DE-627)NLM294371478 
035 |a (NLM)30812585 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Kim, Yul-Ho  |e verfasserin  |4 aut 
245 1 0 |a Identification of Soybean mosaic virus Strains by RT-PCR/RFLP Analysis of Cylindrical Inclusion Coding Region 
264 1 |c 2004 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Revised 20.11.2019 
500 |a published: Print 
500 |a Citation Status PubMed-not-MEDLINE 
520 |a A reverse-transcriptase polymerase chain reaction/restriction fragment length polymorphism (RT-PCR/RFLP) was employed successfully for detection and identification of Soybean mosaic virus (SMV) strains. A primer pair amplifying a 1,385-bp fragment of the cylindrical inclusion (CI) coding region was used for RT-PCR and the RFLP profiles of the RT-PCR products were compared after restriction digestion with RsaI, EcoRI, or AccI restriction endonucleases. These enzymes were chosen based on the nucleotide sequences of SMV strains G2, G5, G5H, G7, and G7H in the CI coding region. These five strains, as well as seedborne SMV isolates from local soybean cultivars, could be differentiated by RT-PCR/RFLP analysis. The results correlated well with strain identification by symptom phenotypes produced on differential cultivars inoculated with strains and isolates. The sensitivity of RT-PCR enabled detection of SMV from plants with necrotic symptoms in which the number of virus particles was too low to be detected by enzyme-linked immunosorbent assay 
650 4 |a Journal Article 
700 1 |a Kim, Ok-Sun  |e verfasserin  |4 aut 
700 1 |a Roh, Jae-Hwan  |e verfasserin  |4 aut 
700 1 |a Moon, Jung-Kyung  |e verfasserin  |4 aut 
700 1 |a Sohn, Soo-In  |e verfasserin  |4 aut 
700 1 |a Lee, Sang-Chul  |e verfasserin  |4 aut 
700 1 |a Lee, Jang-Young  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t Plant disease  |d 1997  |g 88(2004), 6 vom: 20. Juni, Seite 641-644  |w (DE-627)NLM098181742  |x 0191-2917  |7 nnns 
773 1 8 |g volume:88  |g year:2004  |g number:6  |g day:20  |g month:06  |g pages:641-644 
856 4 0 |u http://dx.doi.org/10.1094/PDIS.2004.88.6.641  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_350 
951 |a AR 
952 |d 88  |j 2004  |e 6  |b 20  |c 06  |h 641-644