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231225s2019 xx |||||o 00| ||eng c |
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|a 10.1111/nph.15417
|2 doi
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|a pubmed24n0964.xml
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|a (DE-627)NLM289241308
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|a (NLM)30288750
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|a DE-627
|b ger
|c DE-627
|e rakwb
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| 041 |
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|a eng
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| 100 |
1 |
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|a Jouet, Agathe
|e verfasserin
|4 aut
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| 245 |
1 |
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|a Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field
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|c 2019
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| 336 |
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|a Text
|b txt
|2 rdacontent
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|a ƒaComputermedien
|b c
|2 rdamedia
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| 338 |
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|a ƒa Online-Ressource
|b cr
|2 rdacarrier
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| 500 |
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|a Date Completed 14.01.2020
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| 500 |
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|a Date Revised 13.06.2021
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|a published: Print-Electronic
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|a CommentIn: New Phytol. 2019 Feb;221(3):1177-1179. - PMID 30644579
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|a Citation Status MEDLINE
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| 520 |
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|a © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.
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|a Physiological races of the oomycete Albugo candida are biotrophic pathogens of diverse plant species, primarily the Brassicaceae, and cause infections that suppress host immunity to other pathogens. However, A. candida race diversity and the consequences of host immunosuppression are poorly understood in the field. We report a method that enables sequencing of DNA of plant pathogens and plant-associated microbes directly from field samples (Pathogen Enrichment Sequencing: PenSeq). We apply this method to explore race diversity in A. candida and to detect A. candida-associated microbes in the field (91 A. candida-infected plants). We show with unprecedented resolution that each host plant species supports colonization by one of 17 distinct phylogenetic lineages, each with an unique repertoire of effector candidate alleles. These data reveal the crucial role of sexual and asexual reproduction, polyploidy and host domestication in A. candida specialization on distinct plant species. Our bait design also enabled phylogenetic assignment of DNA sequences from bacteria and fungi from plants in the field. This paper shows that targeted sequencing has a great potential for the study of pathogen populations while they are colonizing their hosts. This method could be applied to other microbes, especially to those that cannot be cultured
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4 |
|a Journal Article
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4 |
|a Research Support, Non-U.S. Gov't
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| 650 |
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4 |
|a Albugo candida
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| 650 |
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4 |
|a DNA sequence capture
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| 650 |
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4 |
|a PenSeq
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| 650 |
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4 |
|a microbiome
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| 650 |
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4 |
|a oomycete
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| 650 |
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4 |
|a plant-pathogen coevolution
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| 650 |
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4 |
|a suppression of plant defence
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| 700 |
1 |
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|a Saunders, Diane G O
|e verfasserin
|4 aut
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| 700 |
1 |
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|a McMullan, Mark
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Ward, Ben
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Furzer, Oliver
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Jupe, Florian
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Cevik, Volkan
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Hein, Ingo
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Thilliez, Gaetan J A
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Holub, Eric
|e verfasserin
|4 aut
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| 700 |
1 |
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|a van Oosterhout, Cock
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Jones, Jonathan D G
|e verfasserin
|4 aut
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| 773 |
0 |
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|i Enthalten in
|t The New phytologist
|d 1979
|g 221(2019), 3 vom: 01. Feb., Seite 1529-1543
|w (DE-627)NLM09818248X
|x 1469-8137
|7 nnns
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| 773 |
1 |
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|g volume:221
|g year:2019
|g number:3
|g day:01
|g month:02
|g pages:1529-1543
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| 856 |
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|u http://dx.doi.org/10.1111/nph.15417
|3 Volltext
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|d 221
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