The influence of the metal cations and microhydration on the reaction trajectory of the N3 ↔ O2 thymine proton transfer : Quantum mechanical study

© 2017 Wiley Periodicals, Inc.

Bibliographische Detailangaben
Veröffentlicht in:Journal of computational chemistry. - 1984. - 38(2017), 31 vom: 05. Dez., Seite 2680-2692
1. Verfasser: Šebesta, Filip (VerfasserIn)
Weitere Verfasser: Brela, Mateusz Z, Diaz, Silvia, Miranda, Sebastian, Murray, Jane S, Gutiérrez-Oliva, Soledad, Toro-Labbé, Alejandro, Michalak, Artur, Burda, Jaroslav V
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2017
Zugriff auf das übergeordnete Werk:Journal of computational chemistry
Schlagworte:Journal Article Research Support, Non-U.S. Gov't DFT chemical potential proton transfer reaction coordinate thymine
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520 |a This study involves the intramolecular proton transfer (PT) process on a thymine nucleobase between N3 and O2 atoms. We explore a mechanism for the PT assisted by hexacoordinated divalent metals cations, namely Mg2+ , Zn2+ , and Hg2+ . Our results point out that this reaction corresponds to a two-stage process. The first involves the PT from one of the aqua ligands toward O2. The implications of this stage are the formation of a hydroxo anion bound to the metal center and a positively charged thymine. To proceed to the second stage, a structural change is needed to allow the negatively charged hydroxo ligand to abstract the N3 proton, which represents the final product of the PT reaction. In the presence of the selected hexaaqua cations, the activation barrier is at most 8 kcal/mol. © 2017 Wiley Periodicals, Inc 
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700 1 |a Brela, Mateusz Z  |e verfasserin  |4 aut 
700 1 |a Diaz, Silvia  |e verfasserin  |4 aut 
700 1 |a Miranda, Sebastian  |e verfasserin  |4 aut 
700 1 |a Murray, Jane S  |e verfasserin  |4 aut 
700 1 |a Gutiérrez-Oliva, Soledad  |e verfasserin  |4 aut 
700 1 |a Toro-Labbé, Alejandro  |e verfasserin  |4 aut 
700 1 |a Michalak, Artur  |e verfasserin  |4 aut 
700 1 |a Burda, Jaroslav V  |e verfasserin  |4 aut 
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