A surface site interaction point methodology for macromolecules and huge molecular databases

© 2017 Wiley Periodicals, Inc.

Bibliographische Detailangaben
Veröffentlicht in:Journal of computational chemistry. - 1984. - 38(2017), 7 vom: 15. März, Seite 419-426
1. Verfasser: Oliver, Antoni (VerfasserIn)
Weitere Verfasser: Hunter, Christopher A, Prohens, Rafel, Rosselló, Josep L
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2017
Zugriff auf das übergeordnete Werk:Journal of computational chemistry
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Van der Waals merk molecular force field molecular electrostatic potential surfaces partial atomic charges surface site interaction points Macromolecular Substances
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520 |a Determining the position and magnitude of Surface Site Interaction Points (SSIP) is a useful technique for understanding intermolecular interactions. SSIPs have been used for the prediction of solvation properties and for virtual co-crystal screening. To determine the SSIPs for a molecule, the Molecular Electrostatic Potential Surface (MEPS) is first calculated using ab initio methods such as Density Functional Theory. This leads to a high cost in terms of computation time and is not compatible with the analysis of huge molecular databases. Herein, we present a method for the fast estimation of SSIPs, which is based on the MEPS calculated from MMFF94 atomic partial charges. The results show that this method can be used to calculate SSIPs for large molecular databases with a much higher speed than the original ab initio methodology. © 2017 Wiley Periodicals, Inc 
650 4 |a Journal Article 
650 4 |a Research Support, Non-U.S. Gov't 
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700 1 |a Hunter, Christopher A  |e verfasserin  |4 aut 
700 1 |a Prohens, Rafel  |e verfasserin  |4 aut 
700 1 |a Rosselló, Josep L  |e verfasserin  |4 aut 
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