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231224s2016 xx |||||o 00| ||eng c |
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|a 10.1111/jpy.12406
|2 doi
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|a eng
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| 100 |
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|a Du, Qingwei
|e verfasserin
|4 aut
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| 245 |
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|a The complete chloroplast genome of Gracilariopsis lemaneiformis (Rhodophyta) gives new insight into the evolution of family Gracilariaceae
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|c 2016
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|a Text
|b txt
|2 rdacontent
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|a ƒaComputermedien
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|a ƒa Online-Ressource
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|a Date Completed 26.12.2017
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|a Date Revised 04.01.2018
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|a published: Print-Electronic
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|a Citation Status MEDLINE
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|a © 2016 Phycological Society of America.
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|a The complete chloroplast genome of Gracilariopsis lemaneiformis was recovered from a Next Generation Sequencing data set. Without quadripartite structure, this chloroplast genome (183,013 bp, 27.40% GC content) contains 202 protein-coding genes, 34 tRNA genes, 3 rRNA genes, and 1 tmRNA gene. Synteny analysis showed plasmid incorporation regions in chloroplast genomes of three species of family Gracilariaceae and in Grateloupia taiwanensis of family Halymeniaceae. Combined with reported red algal plasmid sequences in nuclear and mitochondrial genomes, we postulated that red algal plasmids may have played an important role in ancient horizontal gene transfer among nuclear, chloroplast, and mitochondrial genomes. Substitution rate analysis showed that purifying selective forces maintaining stability of protein-coding genes of nine red algal chloroplast genomes over long periods must be strong and that the forces acting on gene groups and single genes of nine red algal chloroplast genomes were similar and consistent. The divergence of Gp. lemaneiformis occurred ~447.98 million years ago (Mya), close to the divergence time of genus Pyropia and Porphyra (443.62 Mya)
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|a Journal Article
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|a Research Support, Non-U.S. Gov't
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|a Gracilariaceae
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| 650 |
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|a Gracilariopsis lemaneiformis
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| 650 |
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4 |
|a chloroplast genome
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| 650 |
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4 |
|a divergence time
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| 650 |
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|a genome and gene evolution
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| 650 |
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4 |
|a regions of plasmid remnants
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| 700 |
1 |
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|a Bi, Guiqi
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Mao, Yunxiang
|e verfasserin
|4 aut
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| 700 |
1 |
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|a Sui, Zhenghong
|e verfasserin
|4 aut
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| 773 |
0 |
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|i Enthalten in
|t Journal of phycology
|d 1966
|g 52(2016), 3 vom: 14. Juni, Seite 441-50
|w (DE-627)NLM098182994
|x 1529-8817
|7 nnns
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| 773 |
1 |
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|g volume:52
|g year:2016
|g number:3
|g day:14
|g month:06
|g pages:441-50
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|u http://dx.doi.org/10.1111/jpy.12406
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