TRANSCRIPTOME ANALYSES REVEAL DIFFERENTIAL GENE EXPRESSION PATTERNS BETWEEN THE LIFE-CYCLE STAGES OF EMILIANIA HUXLEYI (HAPTOPHYTA) AND REFLECT SPECIALIZATION TO DIFFERENT ECOLOGICAL NICHES(1)

© 2011 Phycological Society of America.

Bibliographische Detailangaben
Veröffentlicht in:Journal of phycology. - 1966. - 47(2011), 4 vom: 29. Aug., Seite 829-38
1. Verfasser: Rokitta, Sebastian D (VerfasserIn)
Weitere Verfasser: de Nooijer, Lennart J, Trimborn, Scarlett, de Vargas, Colomban, Rost, Björn, John, Uwe
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2011
Zugriff auf das übergeordnete Werk:Journal of phycology
Schlagworte:Journal Article endocytosis life-cycle stages microarray quantitative RT-PCR transcriptome profiling
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245 1 0 |a TRANSCRIPTOME ANALYSES REVEAL DIFFERENTIAL GENE EXPRESSION PATTERNS BETWEEN THE LIFE-CYCLE STAGES OF EMILIANIA HUXLEYI (HAPTOPHYTA) AND REFLECT SPECIALIZATION TO DIFFERENT ECOLOGICAL NICHES(1) 
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500 |a Date Completed 30.03.2016 
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520 |a © 2011 Phycological Society of America. 
520 |a Coccolithophores, especially the abundant, cosmopolitan species Emiliania huxleyi (Lohmann) W. W. Hay et H. P. Mohler, are one of the main driving forces of the oceanic carbonate pump and contribute significantly to global carbon cycling, due to their ability to calcify. A recent study indicates that termination of diploid blooms by viral infection induces life-cycle transition, and speculation has arisen about the role of the haploid, noncalcifying stage in coccolithophore ecology. To explore gene expression patterns in both life-cycle stages, haploid and diploid cells of E. huxleyi (RCC 1217 and RCC 1216) were acclimated to limiting and saturating photon flux densities. Transcriptome analyses were performed to assess differential genomic expression related to different ploidy levels and acclimation light intensities. Analyses indicated that life-cycle stages exhibit different properties of regulating genome expression (e.g., pronounced gene activation and gene silencing in the diploid stage), proteome maintenance (e.g., increased turnover of proteins in the haploid stage), as well as metabolic processing (e.g., pronounced primary metabolism and motility in the haploid stage and calcification in the diploid stage). Furthermore, higher abundances of transcripts related to endocytotic and digestive machinery were observed in the diploid stage. A qualitative feeding experiment indicated that both life-cycle stages are capable of particle uptake (0.5 μm diameter) in late-stationary growth phase. Results showed that the two life-cycle stages represent functionally distinct entities that are evolutionarily shaped to thrive in the environment they typically inhabit 
650 4 |a Journal Article 
650 4 |a endocytosis 
650 4 |a life-cycle stages 
650 4 |a microarray 
650 4 |a quantitative RT-PCR 
650 4 |a transcriptome profiling 
700 1 |a de Nooijer, Lennart J  |e verfasserin  |4 aut 
700 1 |a Trimborn, Scarlett  |e verfasserin  |4 aut 
700 1 |a de Vargas, Colomban  |e verfasserin  |4 aut 
700 1 |a Rost, Björn  |e verfasserin  |4 aut 
700 1 |a John, Uwe  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t Journal of phycology  |d 1966  |g 47(2011), 4 vom: 29. Aug., Seite 829-38  |w (DE-627)NLM098182994  |x 1529-8817  |7 nnns 
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