Visual Steering and Verification of Mass Spectrometry Data Factorization in Air Quality Research

The study of aerosol composition for air quality research involves the analysis of high-dimensional single particle mass spectrometry data. We describe, apply, and evaluate a novel interactive visual framework for dimensionality reduction of such data. Our framework is based on non-negative matrix f...

Ausführliche Beschreibung

Bibliographische Detailangaben
Veröffentlicht in:IEEE transactions on visualization and computer graphics. - 1996. - 18(2012), 12 vom: 10. Dez., Seite 2275-84
1. Verfasser: Engel, D (VerfasserIn)
Weitere Verfasser: Greff, K, Garth, C, Bein, K, Wexler, A, Hamann, B, Hagen, H
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2012
Zugriff auf das übergeordnete Werk:IEEE transactions on visualization and computer graphics
Schlagworte:Journal Article Research Support, Non-U.S. Gov't
LEADER 01000naa a22002652 4500
001 NLM252628780
003 DE-627
005 20231224164520.0
007 cr uuu---uuuuu
008 231224s2012 xx |||||o 00| ||eng c
024 7 |a 10.1109/TVCG.2012.280  |2 doi 
028 5 2 |a pubmed24n0842.xml 
035 |a (DE-627)NLM252628780 
035 |a (NLM)26357135 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Engel, D  |e verfasserin  |4 aut 
245 1 0 |a Visual Steering and Verification of Mass Spectrometry Data Factorization in Air Quality Research 
264 1 |c 2012 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Completed 01.12.2015 
500 |a Date Revised 11.09.2015 
500 |a published: Print 
500 |a Citation Status PubMed-not-MEDLINE 
520 |a The study of aerosol composition for air quality research involves the analysis of high-dimensional single particle mass spectrometry data. We describe, apply, and evaluate a novel interactive visual framework for dimensionality reduction of such data. Our framework is based on non-negative matrix factorization with specifically defined regularization terms that aid in resolving mass spectrum ambiguity. Thereby, visualization assumes a key role in providing insight into and allowing to actively control a heretofore elusive data processing step, and thus enabling rapid analysis meaningful to domain scientists. In extending existing black box schemes, we explore design choices for visualizing, interacting with, and steering the factorization process to produce physically meaningful results. A domain-expert evaluation of our system performed by the air quality research experts involved in this effort has shown that our method and prototype admits the finding of unambiguous and physically correct lower-dimensional basis transformations of mass spectrometry data at significantly increased speed and a higher degree of ease 
650 4 |a Journal Article 
650 4 |a Research Support, Non-U.S. Gov't 
700 1 |a Greff, K  |e verfasserin  |4 aut 
700 1 |a Garth, C  |e verfasserin  |4 aut 
700 1 |a Bein, K  |e verfasserin  |4 aut 
700 1 |a Wexler, A  |e verfasserin  |4 aut 
700 1 |a Hamann, B  |e verfasserin  |4 aut 
700 1 |a Hagen, H  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t IEEE transactions on visualization and computer graphics  |d 1996  |g 18(2012), 12 vom: 10. Dez., Seite 2275-84  |w (DE-627)NLM098269445  |x 1941-0506  |7 nnns 
773 1 8 |g volume:18  |g year:2012  |g number:12  |g day:10  |g month:12  |g pages:2275-84 
856 4 0 |u http://dx.doi.org/10.1109/TVCG.2012.280  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_350 
951 |a AR 
952 |d 18  |j 2012  |e 12  |b 10  |c 12  |h 2275-84