mtDNA Diversity and Phylogenetic State of Korean Cattle Breed, Chikso

In order to analyze the genetic diversity and phylogenetic status of the Korean Chikso breed, we determined sequences of mtDNA cytochrome b (cyt b) gene and performed phylogenetic analysis using 239 individuals from 5 Chikso populations. Five non-synonymous mutations of a total of 15 polymorphic sit...

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Veröffentlicht in:Asian-Australasian journal of animal sciences. - 1998. - 26(2013), 2 vom: 24. Feb., Seite 163-70
1. Verfasser: Kim, Jae-Hwan (VerfasserIn)
Weitere Verfasser: Byun, Mi Jeong, Kim, Myung-Jick, Suh, Sang Won, Ko, Yeoung-Gyu, Lee, Chang Woo, Jung, Kyoung-Sub, Kim, Eun Sung, Yu, Dae Jung, Kim, Woo Hyun, Choi, Seong-Bok
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2013
Zugriff auf das übergeordnete Werk:Asian-Australasian journal of animal sciences
Schlagworte:Journal Article Chikso Cytochrome b Haplotype Phylogenetic Analysis mtDNA
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520 |a In order to analyze the genetic diversity and phylogenetic status of the Korean Chikso breed, we determined sequences of mtDNA cytochrome b (cyt b) gene and performed phylogenetic analysis using 239 individuals from 5 Chikso populations. Five non-synonymous mutations of a total of 15 polymorphic sites were identified among 239 cyt b coding sequences. Thirteen haplotypes were defined, and haplotype diversity was 0.4709 ranging from 0.2577 to 0.6114. Thirty-five haplotypes (C1-C35) were classified among 9 Asia and 3 European breeds. C2 was a major haplotype that contained 206 sequences (64.6%) from all breeds used. C3-C13 haplotypes were Chikso-specific haplotypes. C1 and C2 haplotypes contained 80.5% of cyt b sequences of Hanwoo, Yanbian, Zaosheng and JB breeds. In phylogenetic analyses, the Chikso breed was contained into B. taurus lineage and was genetically more closely related to two Chinese breeds than to Korean brown cattle, Hanwoo. These results suggest that Chikso and Hanwoo have a genetic difference based on the mtDNA cyt b gene as well as their coat color, sufficient for classification as a separate breed 
650 4 |a Journal Article 
650 4 |a Chikso 
650 4 |a Cytochrome b 
650 4 |a Haplotype 
650 4 |a Phylogenetic Analysis 
650 4 |a mtDNA 
700 1 |a Byun, Mi Jeong  |e verfasserin  |4 aut 
700 1 |a Kim, Myung-Jick  |e verfasserin  |4 aut 
700 1 |a Suh, Sang Won  |e verfasserin  |4 aut 
700 1 |a Ko, Yeoung-Gyu  |e verfasserin  |4 aut 
700 1 |a Lee, Chang Woo  |e verfasserin  |4 aut 
700 1 |a Jung, Kyoung-Sub  |e verfasserin  |4 aut 
700 1 |a Kim, Eun Sung  |e verfasserin  |4 aut 
700 1 |a Yu, Dae Jung  |e verfasserin  |4 aut 
700 1 |a Kim, Woo Hyun  |e verfasserin  |4 aut 
700 1 |a Choi, Seong-Bok  |e verfasserin  |4 aut 
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