Genome-wide analysis and expression profiling of the Solanum tuberosum aquaporins

Genome-wide analysis and expression profiling of the Solanum tuberosum aquaporins

Copyright © 2013 Elsevier Masson SAS. All rights reserved.

Bibliographische Detailangaben
Veröffentlicht in:Plant physiology and biochemistry : PPB. - 1991. - 73(2013) vom: 15. Dez., Seite 392-404
1. Verfasser: Venkatesh, Jelli (VerfasserIn)
Weitere Verfasser: Yu, Jae-Woong, Park, Se Won
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2013
Zugriff auf das übergeordnete Werk:Plant physiology and biochemistry : PPB
Schlagworte:Journal Article Research Support, Non-U.S. Gov't AQPs Abiotic stress Aquaporin GLPs Homologues MIPs Major intrinsic proteins NIPs mehr... NJ NOD26-like intrinsic proteins PGSC PIPs Phylogenetics SIPs Solanum tuberosum TIPs XIPs aquaporins major intrinsic proteins neighbour-joining plasma membrane intrinsic proteins potato genome sequencing consortium quaglyceroporins small basic intrinsic proteins tonoplast intrinsic proteins x-intrinsic proteins Aquaporins Plant Proteins major intrinsic protein, plant
Beschreibung
Zusammenfassung:Copyright © 2013 Elsevier Masson SAS. All rights reserved.
Aquaporins belongs to the major intrinsic proteins involved in the transcellular membrane transport of water and other small solutes. A comprehensive genome-wide search for the homologues of Solanum tuberosum major intrinsic protein (MIP) revealed 41 full-length potato aquaporin genes. All potato aquaporins are grouped into five subfamilies; plasma membrane intrinsic proteins (PIPs), tonoplast intrinsic proteins (TIPs), NOD26-like intrinsic proteins (NIPs), small basic intrinsic proteins (SIPs) and x-intrinsic proteins (XIPs). Functional predictions based on the aromatic/arginine (ar/R) selectivity filters and Froger's positions showed a remarkable difference in substrate transport specificity among subfamilies. The expression pattern of potato aquaporins, examined by qPCR analysis, showed distinct expression profiles in various organs and tuber developmental stages. Furthermore, qPCR analysis of potato plantlets, subjected to various abiotic stresses revealed the marked effect of stresses on expression levels of aquaporins. Taken together, the expression profiles of aquaporins imply that aquaporins play important roles in plant growth and development, in addition to maintaining water homeostasis in response to environmental stresses
Beschreibung:Date Completed 29.07.2014
Date Revised 30.09.2020
published: Print-Electronic
Citation Status MEDLINE
ISSN:1873-2690
DOI:10.1016/j.plaphy.2013.10.025