Single-nucleotide polymorphisms and association analysis of drought-resistance gene TaSnRK2.8 in common wheat
Copyright © 2013 The Authors. Published by Elsevier Masson SAS.. All rights reserved.
| Veröffentlicht in: | Plant physiology and biochemistry : PPB. - 1991. - 70(2013) vom: 10. Sept., Seite 174-81 |
|---|---|
| 1. Verfasser: | |
| Weitere Verfasser: | , , , |
| Format: | Online-Aufsatz |
| Sprache: | English |
| Veröffentlicht: |
2013
|
| Zugriff auf das übergeordnete Werk: | Plant physiology and biochemistry : PPB |
| Schlagworte: | Journal Article Research Support, Non-U.S. Gov't Drought response Single nucleotide polymorphism Triticum aestivum Plant Proteins Water 059QF0KO0R Protein Serine-Threonine Kinases EC 2.7.11.1 |
| Zusammenfassung: | Copyright © 2013 The Authors. Published by Elsevier Masson SAS.. All rights reserved. TaSnRK2.8, an SnRK2 (sucrose non-fermenting1-related protein kinase 2) member of wheat, confers enhanced multi-stress tolerances in carbohydrate metabolism. In the study, two types of genomic sequences of TaSnRK2.8 were detected in common wheat. Sequencing analysis showed that there was a variation-enriched region, designated TaSnRK2.8-A-C, covering the eighth intron, the ninth exon and the 3'-flanking region of TaSnRK2.8-A, and no divergence occurred in TaSnRK2.8-B. Single nucleotide polymorphisms in the TaSnRK2.8-A-C region were investigated in 165 wheat accessions. Three of 751 sequenced nucleotide sites were polymorphic. Nucleotide diversity (π) in the region was 0.00068. Sliding-window analysis demonstrated that the nucleotide diversity was highest in the 3'-flanking sequence. As predicted, the highly frequent SNP was significantly associated with seedling biomass under normal conditions, plant height, flag leaf width and water-soluble carbohydrate content under drought conditions. Analysis of variance of correlated traits between accessions with the A and G genotypes indicated that the A variant was the more favorable allele associated with significantly increased seedling biomass and water-soluble carbohydrates. Based on the SNP, we developed a functional marker of TaSnRK2.8-A-C, that could be utilized in wheat breeding programs aimed at improving seedling biomass and water-soluble carbohydrates, and consequently to enhance stress resistance in wheat |
|---|---|
| Beschreibung: | Date Completed 13.02.2014 Date Revised 03.12.2021 published: Print-Electronic Citation Status MEDLINE |
| ISSN: | 1873-2690 |
| DOI: | 10.1016/j.plaphy.2013.04.010 |