A new FFT-based algorithm to compute Born radii in the generalized Born theory of biomolecule solvation

In this paper, a new method for calculating effective atomic radii within the generalized Born (GB) model of implicit solvation is proposed, for use in computer simulations of bio-molecules. First, a new formulation for the GB radii is developed, in which smooth kernels are used to eliminate the div...

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Publié dans:Journal of computational physics. - 1986. - 227(2008), 24 vom: 20. Dez., Seite 10162-10177
Auteur principal: Cai, Wei (Auteur)
Autres auteurs: Xu, Zhenli, Baumketner, Andrij
Format: Article
Langue:English
Publié: 2008
Accès à la collection:Journal of computational physics
Sujets:Journal Article