New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses

The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA meth...

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Bibliographische Detailangaben
Veröffentlicht in:BioTechniques. - 1991. - 47(2009), 3 vom: 23. Sept., Seite 781-3
1. Verfasser: Rohde, Christian (VerfasserIn)
Weitere Verfasser: Zhang, Yingying, Stamerjohanns, Heinrich, Hecher, Kurt, Reinhardt, Richard, Jeltsch, Albert
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2009
Zugriff auf das übergeordnete Werk:BioTechniques
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Sulfites hydrogen sulfite OJ9787WBLU
Beschreibung
Zusammenfassung:The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA methylation levels and clustering and comparison of tissue methylation patterns. It can also be used for data not processed by BDPC. In addition, several functions of the existing BDPC compilation module have been improved
Beschreibung:Date Completed 30.09.2010
Date Revised 15.11.2012
published: Print
Citation Status MEDLINE
ISSN:1940-9818
DOI:10.2144/000113196