A new strategy to improve the predictive ability of the local lazy regression and its application to the QSAR study of melanin-concentrating hormone receptor 1 antagonists

2009 Wiley Periodicals, Inc.

Bibliographische Detailangaben
Veröffentlicht in:Journal of computational chemistry. - 1984. - 31(2010), 5 vom: 15. Apr., Seite 973-85
1. Verfasser: Li, Jiazhong (VerfasserIn)
Weitere Verfasser: Li, Shuyan, Lei, Beilei, Liu, Huanxiang, Yao, Xiaojun, Liu, Mancang, Gramatica, Paola
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2010
Zugriff auf das übergeordnete Werk:Journal of computational chemistry
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Pyrimidinones Receptors, Pituitary Hormone melanin-concentrating hormone receptor
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520 |a In the quantitative structure-activity relationship (QSAR) study, local lazy regression (LLR) can predict the activity of a query molecule by using the information of its local neighborhood without need to produce QSAR models a priori. When a prediction is required for a query compound, a set of local models including different number of nearest neighbors are identified. The leave-one-out cross-validation (LOO-CV) procedure is usually used to assess the prediction ability of each model, and the model giving the lowest LOO-CV error or highest LOO-CV correlation coefficient is chosen as the best model. However, it has been proved that the good statistical value from LOO cross-validation appears to be the necessary, but not the sufficient condition for the model to have a high predictive power. In this work, a new strategy is proposed to improve the predictive ability of LLR models and to access the accuracy of a query prediction. The bandwidth of k neighbor value for LLR is optimized by considering the predictive ability of local models using an external validation set. This approach was applied to the QSAR study of a series of thienopyrimidinone antagonists of melanin-concentrating hormone receptor 1. The obtained results from the new strategy shows evident improvement compared with the commonly used LOO-CV LLR methods and the traditional global linear model 
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650 4 |a Research Support, Non-U.S. Gov't 
650 7 |a Pyrimidinones  |2 NLM 
650 7 |a Receptors, Pituitary Hormone  |2 NLM 
650 7 |a melanin-concentrating hormone receptor  |2 NLM 
700 1 |a Li, Shuyan  |e verfasserin  |4 aut 
700 1 |a Lei, Beilei  |e verfasserin  |4 aut 
700 1 |a Liu, Huanxiang  |e verfasserin  |4 aut 
700 1 |a Yao, Xiaojun  |e verfasserin  |4 aut 
700 1 |a Liu, Mancang  |e verfasserin  |4 aut 
700 1 |a Gramatica, Paola  |e verfasserin  |4 aut 
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