Random Amplified Polymorphic DNA Analysis of Heterodera cruciferae and H. schachtii populations

Heterodera schachtii and H. cruciferae are sympatric in California and frequently occur in the same field upon the same host. We have investigated the use of polymerase chain reaction (PCR) amplification of nematode DNA sequences to differentiate H. schachtii and H. cruciferae and to assess genetic...

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Veröffentlicht in:Journal of nematology. - 1969. - 24(1992), 3 vom: 15. Sept., Seite 343-51
1. Verfasser: Caswell-Chen, E P (VerfasserIn)
Weitere Verfasser: Williamson, V M, Wu, F F
Format: Aufsatz
Sprache:English
Veröffentlicht: 1992
Zugriff auf das übergeordnete Werk:Journal of nematology
Schlagworte:Journal Article DNA H. schachtii Heterodera cruciferae PCR RAPD marker cyst nematode diagnostic nematode population genetics
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245 1 0 |a Random Amplified Polymorphic DNA Analysis of Heterodera cruciferae and H. schachtii populations 
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520 |a Heterodera schachtii and H. cruciferae are sympatric in California and frequently occur in the same field upon the same host. We have investigated the use of polymerase chain reaction (PCR) amplification of nematode DNA sequences to differentiate H. schachtii and H. cruciferae and to assess genetic variability within each species. Single, random oligodeoxyribonucleotide primers were used to generate PCR-amplified fragments, termed RAPD (random amplified polymorphic DNA) markers, from genomic DNA of each species. Each of 19 different random primers yielded from 2 to 12 fragments whose size ranged from 200 to 1,500 bp. Reproducible differences in fragment patterns allowed differentiation of the two species with each primer. Similarities and differences among six different geographic populations of H. schachtii were detected. The potential application of RAPD analysis to relationships among nematode populations was assessed through cluster analysis of these six different populations, with 78 scorable markers from 10 different random primers. DNA from single cysts was successfully amplified, and genetic variability was revealed within geographic populations. The use of RAPD markers to assess genetic variability is a simple, reproducible technique that does not require radioisotopes. This powerful new technique can be used as a diagnostic tool and should have broad application in nematology 
650 4 |a Journal Article 
650 4 |a DNA 
650 4 |a H. schachtii 
650 4 |a Heterodera cruciferae 
650 4 |a PCR 
650 4 |a RAPD marker 
650 4 |a cyst nematode 
650 4 |a diagnostic 
650 4 |a nematode 
650 4 |a population genetics 
700 1 |a Williamson, V M  |e verfasserin  |4 aut 
700 1 |a Wu, F F  |e verfasserin  |4 aut 
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