Efficient evaluation of sampling quality of molecular dynamics simulations by clustering of dihedral torsion angles and Sammon mapping

A direct conformational clustering and mapping approach for peptide conformations based on backbone dihedral angles has been developed and applied to compare conformational sampling of Met-enkephalin using two molecular dynamics (MD) methods. Efficient clustering in dihedrals has been achieved by ev...

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Bibliographische Detailangaben
Veröffentlicht in:Journal of computational chemistry. - 1984. - 30(2009), 3 vom: 10. Feb., Seite 479-92
1. Verfasser: Frickenhaus, Stephan (VerfasserIn)
Weitere Verfasser: Kannan, Srinivasaraghavan, Zacharias, Martin
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2009
Zugriff auf das übergeordnete Werk:Journal of computational chemistry
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Enkephalin, Methionine 58569-55-4