Effects of electron attachment on C5'-O5' and C1'-N1 bond cleavages of pyrimidine nucleotides : A theoretical study

(c) 2008 Wiley Periodicals, Inc.

Bibliographische Detailangaben
Veröffentlicht in:Journal of computational chemistry. - 1984. - 29(2008), 12 vom: 15. Sept., Seite 2025-32
1. Verfasser: Xie, Hujun (VerfasserIn)
Weitere Verfasser: Wu, Ruibo, Xia, Fei, Cao, Zexing
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2008
Zugriff auf das übergeordnete Werk:Journal of computational chemistry
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Pyrimidine Nucleotides
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520 |a Sugar-base C(1')-N(1) and phosphate-sugar C(5')-O(5') bond breakings of 2'-deoxycytidine-5'-monophosphates (dCMP) and 2'-deoxythymidine-5'- monophosphates (dTMP) and their radical anions have been explored theoretically at the B3LYP/DZP++ level of theory. Calculations show that the low-energy electrons attachment to the pyrimidine nucleotides results in remarkable structural and chemical bonding changes. Predicted Gibbs free energies of reaction DeltaG for the C(5')-O(5') bond dissociation process of the radical anions are -14.6 and -11.5 kcal mol(-1), respectively, and such dissociation processes may be intrinsically spontaneous in the gas phase. Furthermore, the C(5')-O(5') bond cleavage processes of the anionic dCMP and dTMP were predicted to have activation energies of 6.9 and 8.0 kcal mol(-1) in the gas phase, respectively, much lower than the barriers for the C(1')-N(1) bond breaking process, showing that the C-O bond dissociation in DNA single strand breaks is a dominant process as observed experimentally 
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