Expression analysis of light-regulated genes isolated from a full-length-enriched cDNA library of Onosma paniculatum cell cultures

Shikonin and its derivatives are formed in large amounts in dark-cultured Onosma paniculatum cells. In order to isolate and identify the genes regulating shikonin biosynthesis, we constructed and characterized a full-length-enriched cDNA library of dark-cultured cells by using the SMART (Switching M...

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Veröffentlicht in:Journal of plant physiology. - 1979. - 165(2008), 14 vom: 29. Sept., Seite 1474-82
1. Verfasser: Qi, Jin-Liang (VerfasserIn)
Weitere Verfasser: Zhang, Wen-Ju, Liu, Shao-Hua, Wang, Hong, Sun, Deng-Yun, Xu, Guo-Hua, Shi, Ming-Wang, Liu, Zhi, Zhang, Ming-Sheng, Zhang, Hui-Ming, Yang, Yong-Hua
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2008
Zugriff auf das übergeordnete Werk:Journal of plant physiology
Schlagworte:Journal Article Research Support, Non-U.S. Gov't DNA, Complementary Ethylenes Naphthoquinones shikonin 3IK6592UBW ethylene 91GW059KN7
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520 |a Shikonin and its derivatives are formed in large amounts in dark-cultured Onosma paniculatum cells. In order to isolate and identify the genes regulating shikonin biosynthesis, we constructed and characterized a full-length-enriched cDNA library of dark-cultured cells by using the SMART (Switching Mechanism At 5'-end of RNA Transcript) cDNA synthesis and LD-PCR (long-distance PCR) strategies. The titer of the primary cDNA library was 1.04 x 10(6)pfu/mL with a recombination rate of 99.60%. Most of the cDNA inserts ranged from 1.0 to 2.5 kb, and 78.33% of the 76 randomly selected clones contained full-length coding regions. Expression analysis of randomly selected genes by small scale microarray revealed that 23 genes were down-regulated, including 17 genes with known functions, 2 genes with putative functions, and 4 novel genes, and that 3 genes were up-regulated (two-fold) in cells cultured under white light as compared with those cultured in the dark. Interestingly, two of the down-regulated genes, encoding aci-reductone dioxygenase (ARD)-like protein and ethylene responsive factor (ERF), are involved in ethylene biosynthesis and signal transduction, implying that ethylene might play an important role as a signal molecule in light-regulated shikonin formation. These data contribute to a better understanding of light-involvement in regulating the formation of plant secondary metabolites 
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700 1 |a Zhang, Wen-Ju  |e verfasserin  |4 aut 
700 1 |a Liu, Shao-Hua  |e verfasserin  |4 aut 
700 1 |a Wang, Hong  |e verfasserin  |4 aut 
700 1 |a Sun, Deng-Yun  |e verfasserin  |4 aut 
700 1 |a Xu, Guo-Hua  |e verfasserin  |4 aut 
700 1 |a Shi, Ming-Wang  |e verfasserin  |4 aut 
700 1 |a Liu, Zhi  |e verfasserin  |4 aut 
700 1 |a Zhang, Ming-Sheng  |e verfasserin  |4 aut 
700 1 |a Zhang, Hui-Ming  |e verfasserin  |4 aut 
700 1 |a Yang, Yong-Hua  |e verfasserin  |4 aut 
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