Detection of mutations and polymorphisms using fluorescence-based dideoxy fingerprinting (F-ddF)

We have adapted the dideoxy finger-printing (ddF) technique for detecting DNA sequence variants to fluorescence detection (F-ddF) using an Applied Biosystems Model 373A DNA Sequencer equipped with GENESCAN 672 software and an external temperature control device. The fingerprints can be precisely ali...

Ausführliche Beschreibung

Bibliographische Detailangaben
Veröffentlicht in:BioTechniques. - 1991. - 17(1994), 4 vom: 03. Okt., Seite 742-3, 746-7, 748-53
1. Verfasser: Ellison, J (VerfasserIn)
Weitere Verfasser: Squires, G, Crutchfield, C, Goldman, D
Format: Aufsatz
Sprache:English
Veröffentlicht: 1994
Zugriff auf das übergeordnete Werk:BioTechniques
Schlagworte:Journal Article Globins 9004-22-2
LEADER 01000caa a22002652c 4500
001 NLM078085853
003 DE-627
005 20250129153319.0
007 tu
008 231222s1994 xx ||||| 00| ||eng c
028 5 2 |a pubmed25n0261.xml 
035 |a (DE-627)NLM078085853 
035 |a (NLM)7833039 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Ellison, J  |e verfasserin  |4 aut 
245 1 0 |a Detection of mutations and polymorphisms using fluorescence-based dideoxy fingerprinting (F-ddF) 
264 1 |c 1994 
336 |a Text  |b txt  |2 rdacontent 
337 |a ohne Hilfsmittel zu benutzen  |b n  |2 rdamedia 
338 |a Band  |b nc  |2 rdacarrier 
500 |a Date Completed 01.03.1995 
500 |a Date Revised 21.11.2008 
500 |a published: Print 
500 |a Citation Status MEDLINE 
520 |a We have adapted the dideoxy finger-printing (ddF) technique for detecting DNA sequence variants to fluorescence detection (F-ddF) using an Applied Biosystems Model 373A DNA Sequencer equipped with GENESCAN 672 software and an external temperature control device. The fingerprints can be precisely aligned using an internal standard run in the same lanes. This facilitates location and characterization of mobility changes resulting from sequence variants. As compared to fluorescence detected single-strand conformation polymorphism analysis (F-SSCP), F-ddF is equally efficient for detection of sequence variants, and it offers additional advantages. These include information regarding location of the sequence variation, greater reliability for distinguishing one sequence variant from another and the capacity to generate large PCR fragments and analyze them in smaller subsegments. Read length and overall quality of data from F-ddF are sequence-dependent when Taq DNA polymerase is used, but reducing terminator concentration can extend read length. The strengths and weakness of F-ddF and F-SSCP are different. Thus F-ddF may work better in a given situation than F-SSCP and vice versa. A strategy for using F-ddF to circumvent limitations of F-SSCP is described 
650 4 |a Journal Article 
650 7 |a Globins  |2 NLM 
650 7 |a 9004-22-2  |2 NLM 
700 1 |a Squires, G  |e verfasserin  |4 aut 
700 1 |a Crutchfield, C  |e verfasserin  |4 aut 
700 1 |a Goldman, D  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t BioTechniques  |d 1991  |g 17(1994), 4 vom: 03. Okt., Seite 742-3, 746-7, 748-53  |w (DE-627)NLM012627046  |x 1940-9818  |7 nnas 
773 1 8 |g volume:17  |g year:1994  |g number:4  |g day:03  |g month:10  |g pages:742-3, 746-7, 748-53 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_21 
912 |a GBV_ILN_22 
912 |a GBV_ILN_24 
912 |a GBV_ILN_39 
912 |a GBV_ILN_40 
912 |a GBV_ILN_50 
912 |a GBV_ILN_60 
912 |a GBV_ILN_62 
912 |a GBV_ILN_65 
912 |a GBV_ILN_70 
912 |a GBV_ILN_99 
912 |a GBV_ILN_121 
912 |a GBV_ILN_130 
912 |a GBV_ILN_227 
912 |a GBV_ILN_350 
912 |a GBV_ILN_618 
912 |a GBV_ILN_640 
912 |a GBV_ILN_754 
912 |a GBV_ILN_2001 
912 |a GBV_ILN_2002 
912 |a GBV_ILN_2003 
912 |a GBV_ILN_2005 
912 |a GBV_ILN_2006 
912 |a GBV_ILN_2007 
912 |a GBV_ILN_2008 
912 |a GBV_ILN_2009 
912 |a GBV_ILN_2010 
912 |a GBV_ILN_2012 
912 |a GBV_ILN_2015 
912 |a GBV_ILN_2018 
912 |a GBV_ILN_2023 
912 |a GBV_ILN_2035 
912 |a GBV_ILN_2040 
912 |a GBV_ILN_2060 
912 |a GBV_ILN_2099 
912 |a GBV_ILN_2105 
912 |a GBV_ILN_2121 
912 |a GBV_ILN_2470 
951 |a AR 
952 |d 17  |j 1994  |e 4  |b 03  |c 10  |h 742-3, 746-7, 748-53