Exploring epitranscriptomics for crop improvement and environmental stress tolerance

Copyright © 2022 Elsevier Masson SAS. All rights reserved.

Bibliographische Detailangaben
Veröffentlicht in:Plant physiology and biochemistry : PPB. - 1991. - 183(2022) vom: 15. Juli, Seite 56-71
1. Verfasser: Yang, Xiangbo (VerfasserIn)
Weitere Verfasser: Patil, Suraj, Joshi, Shrushti, Jamla, Monica, Kumar, Vinay
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2022
Zugriff auf das übergeordnete Werk:Plant physiology and biochemistry : PPB
Schlagworte:Journal Article Review Environmental stress Epigenetics Epitranscriptome High-throughput sequencing Methylation Post-transcriptional regulations RNA Modifications RNA 63231-63-0
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520 |a Climate change and stressful environmental conditions severely hamper crop growth, development and yield. Plants respond to environmental perturbations, through their plasticity provided by key-genes, governed at post-/transcriptional levels. Gene-regulation in plants is a multilevel process controlled by diverse cellular entities that includes transcription factors (TF), epigenetic regulators and non-coding RNAs beside others. There are successful studies confirming the role of epigenetic modifications (DNA-methylation/histone-modifications) in gene expression. Recent years have witnessed emergence of a highly specialized field the "Epitranscriptomics". Epitranscriptomics deals with investigating post-transcriptional RNA chemical-modifications present across the life forms that change structural, functional and biological characters of RNA. However, deeper insights on of epitranscriptomic modifications, with >140 types known so far, are to be understood fully. Researchers have identified epitranscriptome marks (writers, erasers and readers) and mapped the site-specific RNA modifications (m6A, m5C, 3' uridylation, etc.) responsible for fine-tuning gene expression in plants. Simultaneous advancement in sequencing platforms, upgraded bioinformatic tools and pipelines along with conventional labelled techniques have further given a statistical picture of these epitranscriptomic modifications leading to their potential applicability in crop improvement and developing climate-smart crops. We present herein the insights on epitranscriptomic machinery in plants and how epitranscriptome and epitranscriptomic modifications underlying plant growth, development and environmental stress responses/adaptations. Third-generation sequencing technology, advanced bioinformatics tools and databases being used in plant epitranscriptomics are also discussed. Emphasis is given on potential exploration of epitranscriptome engineering for crop-improvement and developing environmental stress tolerant plants covering current status, challenges and future directions 
650 4 |a Journal Article 
650 4 |a Review 
650 4 |a Environmental stress 
650 4 |a Epigenetics 
650 4 |a Epitranscriptome 
650 4 |a High-throughput sequencing 
650 4 |a Methylation 
650 4 |a Post-transcriptional regulations 
650 4 |a RNA Modifications 
650 7 |a RNA  |2 NLM 
650 7 |a 63231-63-0  |2 NLM 
700 1 |a Patil, Suraj  |e verfasserin  |4 aut 
700 1 |a Joshi, Shrushti  |e verfasserin  |4 aut 
700 1 |a Jamla, Monica  |e verfasserin  |4 aut 
700 1 |a Kumar, Vinay  |e verfasserin  |4 aut 
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773 1 8 |g volume:183  |g year:2022  |g day:15  |g month:07  |g pages:56-71 
856 4 0 |u http://dx.doi.org/10.1016/j.plaphy.2022.04.031  |3 Volltext 
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