Enhancing the fluorescence intensity of DNA microarrays by using cationic surfactants

DNA microarrays have been used as powerful tools in genomics studies and single nucleotide polymorphisms analysis. However, the fluorescence detection used in most conventional DNA microarrays is still limited by its sensitivity. The aim of this study is to use a cationic surfactant, cetyl trimethyl...

Ausführliche Beschreibung

Bibliographische Detailangaben
Veröffentlicht in:Langmuir : the ACS journal of surfaces and colloids. - 1992. - 27(2011), 9 vom: 03. Mai, Seite 5659-64
1. Verfasser: Lai, Siok Lian (VerfasserIn)
Weitere Verfasser: Chen, Chih-Hsin, Yang, Kun-Lin
Format: Online-Aufsatz
Sprache:English
Veröffentlicht: 2011
Zugriff auf das übergeordnete Werk:Langmuir : the ACS journal of surfaces and colloids
Schlagworte:Journal Article Research Support, Non-U.S. Gov't Carbocyanines Cetrimonium Compounds DNA Probes Fluoresceins Solutions Surface-Active Agents cyanine dye 3 6-carboxyfluorescein mehr... 3301-79-9 Cetrimonium Z7FF1XKL7A
LEADER 01000naa a22002652 4500
001 NLM207251983
003 DE-627
005 20231224001702.0
007 cr uuu---uuuuu
008 231224s2011 xx |||||o 00| ||eng c
024 7 |a 10.1021/la2004694  |2 doi 
028 5 2 |a pubmed24n0691.xml 
035 |a (DE-627)NLM207251983 
035 |a (NLM)21469684 
040 |a DE-627  |b ger  |c DE-627  |e rakwb 
041 |a eng 
100 1 |a Lai, Siok Lian  |e verfasserin  |4 aut 
245 1 0 |a Enhancing the fluorescence intensity of DNA microarrays by using cationic surfactants 
264 1 |c 2011 
336 |a Text  |b txt  |2 rdacontent 
337 |a ƒaComputermedien  |b c  |2 rdamedia 
338 |a ƒa Online-Ressource  |b cr  |2 rdacarrier 
500 |a Date Completed 11.08.2011 
500 |a Date Revised 01.12.2018 
500 |a published: Print-Electronic 
500 |a Citation Status MEDLINE 
520 |a DNA microarrays have been used as powerful tools in genomics studies and single nucleotide polymorphisms analysis. However, the fluorescence detection used in most conventional DNA microarrays is still limited by its sensitivity. The aim of this study is to use a cationic surfactant, cetyl trimethylammonium bromide (CTAB), to enhance the fluorescence intensity of 6-carboxy-fluorescene (FAM)-labeled DNA probes immobilized on a DNA microarray. We show that in the presence of CTAB the immobilized FAM-labeled DNA probes is 11-fold brighter than that without exposure to CTAB. Similarly, when we hybridize FAM-labeled DNA targets to a DNA microarray and treat the surface with CTAB solution, the fluorescence intensity shows a 26-fold increase for perfect-match DNA targets. More importantly, the contrast between perfect-match and 1-mismatch DNA is also increased from 1.3-fold to 15-fold. This method offers a simple and efficient technique to enhance the detection limit of DNA microarrays 
650 4 |a Journal Article 
650 4 |a Research Support, Non-U.S. Gov't 
650 7 |a Carbocyanines  |2 NLM 
650 7 |a Cetrimonium Compounds  |2 NLM 
650 7 |a DNA Probes  |2 NLM 
650 7 |a Fluoresceins  |2 NLM 
650 7 |a Solutions  |2 NLM 
650 7 |a Surface-Active Agents  |2 NLM 
650 7 |a cyanine dye 3  |2 NLM 
650 7 |a 6-carboxyfluorescein  |2 NLM 
650 7 |a 3301-79-9  |2 NLM 
650 7 |a Cetrimonium  |2 NLM 
650 7 |a Z7FF1XKL7A  |2 NLM 
700 1 |a Chen, Chih-Hsin  |e verfasserin  |4 aut 
700 1 |a Yang, Kun-Lin  |e verfasserin  |4 aut 
773 0 8 |i Enthalten in  |t Langmuir : the ACS journal of surfaces and colloids  |d 1992  |g 27(2011), 9 vom: 03. Mai, Seite 5659-64  |w (DE-627)NLM098181009  |x 1520-5827  |7 nnns 
773 1 8 |g volume:27  |g year:2011  |g number:9  |g day:03  |g month:05  |g pages:5659-64 
856 4 0 |u http://dx.doi.org/10.1021/la2004694  |3 Volltext 
912 |a GBV_USEFLAG_A 
912 |a SYSFLAG_A 
912 |a GBV_NLM 
912 |a GBV_ILN_22 
912 |a GBV_ILN_350 
912 |a GBV_ILN_721 
951 |a AR 
952 |d 27  |j 2011  |e 9  |b 03  |c 05  |h 5659-64